Pairwise Alignments

Query, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  185 bits (470), Expect = 3e-51
 Identities = 144/521 (27%), Positives = 254/521 (48%), Gaps = 55/521 (10%)

Query: 4   RILGLAAGLAVLFASTSWAQSITVAIGSEPSTLDPQLRDDGGERQVNDNIYEALMARTAT 63
           R+L + A   +    ++ AQ++++      S++DP+L +  G+R +  + +++++     
Sbjct: 3   RLLPIVAAALLATGVSASAQTLSIGFADPVSSVDPELNNHAGDRSLALHFWDSIINSRDG 62

Query: 64  GDLVPGLAADAPTQVDARTWQFKLREGIKFHNGEPFNADAVVASVLRVIDPANNSEQMAY 123
           G L P LA+     +D +TW+FKLR  IK+ +G PF+AD +V S  R  +   +    +Y
Sbjct: 63  GKLEPALASSWKA-LDDKTWEFKLRTDIKWQDGTPFSADDIVFSFQRSRNVPGSVA--SY 119

Query: 124 LGPLSGAEKV---DDLAVRIITSAPDPILP---ARMYWLKMVPAAYSKNATAIAEKPV-G 176
            G L   E V   D   + + T+ P+P+LP   A +Y +       SK     A + V G
Sbjct: 120 SGALRTVESVTAKDPATLIVKTNTPNPMLPLEIASIYIVSKHVGEKSKTEDYNAGRAVVG 179

Query: 177 TGPYKFGTWDRGNSITMTANTDYWGGEPQIDDVTYRFVSEAGTRLSGLVAGEFDVVVNLL 236
           TGPYKF ++  G+      N  Y+G +P  + V YRF++    R + L+AG+ DV+  + 
Sbjct: 180 TGPYKFVSYVPGDRTVFERNPGYYGPKPLWEKVNYRFINNGAARTAALLAGDVDVIDKVA 239

Query: 237 PEFADSVPQAKSVS-----GLE------------TSVIILGVDNPAVK----DVRVRRAL 275
               + + +   VS     GL                I      P  K    DVRVR+AL
Sbjct: 240 VTDVEKLRKDPKVSVYTYPGLRVLLLQPTFKAGPNEFITDNAGKPLEKNPLLDVRVRQAL 299

Query: 276 NMAIDRHALAESLFAGNAKVTTGQLVLPGAFGYNESLENWPYDPQGAKKLIAEAG-AAGT 334
           ++AI+R A+ + +  G       Q +  G+FGYN  +++  Y+ + AKKL+AEAG   G 
Sbjct: 300 SLAINRKAIVDRVLQGTV-TEANQWMPKGSFGYNPDVKDIAYNAEQAKKLLAEAGFPQGF 358

Query: 335 TIDLVGEAGRWLKDRELIEAVAAYWTEVGLKVNVEILEFSVYLDR-----------IFDM 383
            I +     R+ +  E ++AVA +W+ +G+K  VE++ ++VY  R            +  
Sbjct: 359 QIAIHVPGDRYPQAPETVQAVAQFWSRIGVKTKVEVVPWAVYSGRANKNEYAVSVIAWGN 418

Query: 384 GNRPDSYFVLNSNELFDADREMAFAYEPGQGG---ASNSDKALGEAIRAARSEVDGEKRK 440
           G     Y +L +    DA R        G+G       S++++ +A+ AA  E D ++R+
Sbjct: 419 GTGEAGYGLLQTLTTPDAKR--------GRGSNNWGRYSNESVDKALDAATVEFDAKRRE 470

Query: 441 AAYAVITKKLHDEAYDVPLLNHQDIYGMSEKMEWQPRVDSK 481
           A +    K + D+   +PL ++Q+I+   + ++  P +  +
Sbjct: 471 AIFRHAAKLVTDDVGQIPLYHYQNIWAAKKGLKVVPLLSDR 511