Pairwise Alignments

Query, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 520 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  140 bits (354), Expect = 8e-38
 Identities = 131/510 (25%), Positives = 222/510 (43%), Gaps = 55/510 (10%)

Query: 6   LGLAAGLAVLFASTSWAQSITVAIGSEPSTLDPQLRDDGGERQVNDNIYEALMARTATGD 65
           LGLAA + +    +  A+++      +  +LDP    D       +++YE L+   A   
Sbjct: 5   LGLAATMLMGLTLSGHAETLKWGAARDIYSLDPYSYGDSYTLSFLNHVYEGLVRYDANLK 64

Query: 66  LVPGLAADAPTQVDARTWQFKLREGIKFHNGEPFNADAVVASVLRVIDPANNSEQMAYLG 125
           + P LA    T  D   W+F LR+G+KFH+G  F AD V+AS+ RV DP   S     L 
Sbjct: 65  IEPALAESWETVSDT-VWRFHLRKGVKFHDGAEFTADDVLASLKRVSDPV--SPLRGNLP 121

Query: 126 PLSGAEKVDDLAVRIITSAPDPILPARMYWLKMVPAAYSKNATAIAEKPV---------- 175
               ++KVDD  + I  S P P+L   +  + +  A + K  T  +EKP           
Sbjct: 122 AYKSSKKVDDHTIDIELSGPYPLLLNDLTNIHVFDAGWLK--TNNSEKPTDVGAKIEGYA 179

Query: 176 -----GTGPYKFGTWDRGNSITMTANTDYWG--GEPQIDDVTYRFVSEAGTRLSGLVAGE 228
                GTGP+K  +    +   +  N D+W    +  +D + +  ++ A TR++ L++GE
Sbjct: 180 TYHTNGTGPFKLESRVPDSKTVLVKNPDWWDKTSKSNVDRIEFTPITSAATRVAALLSGE 239

Query: 229 FDVVVNL----LPEFADSVPQAKSVSGLETSVIILGVDNP---------AVKDVRVRRAL 275
            +   N     LP    + P  K +   +   +++G +              D+RVR+A 
Sbjct: 240 VNFTENAPSQDLPRL-QAQPDLKVMERTDLRTVMVGFNRKPELANGSENKFNDLRVRQAF 298

Query: 276 NMAIDRHALAESLFAGNAKVTTGQLVLPGAFGYNESLE-NWPYDPQGAKKLIAEAGAAGT 334
             A+DR  + + +  G ++ T G +V P   GY   L+    +DP  +KKL+AEAGA+  
Sbjct: 299 AHALDRDLIQQRVMRGKSR-TAGAVVAPEIPGYAPELDTTLAFDPALSKKLLAEAGASDY 357

Query: 335 TIDLVGEAGRWLKDRELIEAVAAYWTEVGLKVNVEILEFSVYLDR---------IFDMGN 385
              LV     ++ + EL + +    +  G K  ++I   +    +         +     
Sbjct: 358 PFTLVCTTDAYVNEEELCQGLVNLLSRAGFKPQLDIAPTAAQAPKRTSGKSDVYLIGWAT 417

Query: 386 RP--DSYFVLNSNELFDADREMAFAYEPGQGGASNSDKALGEAIRAARSEVDGEKRKAAY 443
            P  DSY +L   ++       A  +  G       DK + +    A +E+D  KR A  
Sbjct: 418 EPMLDSYSIL--LQMIQTKTANAGVFNWGGWSYPEIDKLIVQ----ASTEMDRTKRLALQ 471

Query: 444 AVITKKLHDEAYDVPLLNHQDIYGMSEKME 473
           +   + + DE   +PL      + MS K++
Sbjct: 472 SKALQMVKDEIVMLPLHQQPMAWVMSNKID 501