Pairwise Alignments

Query, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  127 bits (318), Expect = 1e-33
 Identities = 128/516 (24%), Positives = 221/516 (42%), Gaps = 54/516 (10%)

Query: 8   LAAGLAVLFASTSWAQSITVAIGSEPSTLDPQLRDDGGERQVN-DNIYEALMARTATGD- 65
           L AGL     S   A ++       P+  DP     G +   + + ++  L      G  
Sbjct: 11  LGAGLLSGAPSAVAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRLTQFERGGTA 70

Query: 66  LVPGLAADAPTQVDARTWQFKLREGIKFHNGE------PFNADAVVASVLRVIDPANNSE 119
           ++PGLA       D +T+ F LREG+KFH  +      PFNAD V+ +  R++D  N   
Sbjct: 71  VIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLDKDNPFR 130

Query: 120 Q-----------MAYLGPLSGAEKVDDLAVRIITSAPDP--ILPARMYWLKMVPAAYS-- 164
           +           M     ++  EK+D+  V+   +  D   I    M +  +  A Y+  
Sbjct: 131 KAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQSAEYADQ 190

Query: 165 --KNATA--IAEKPVGTGPYKFGTWDRGNSITMTANTDYWGGEP-QIDDVTYRFVSEAGT 219
             KN  A  I +KP+GTGP+ F  + +   I    N DYW  E  +ID++ +   ++A  
Sbjct: 191 LLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLIFAITTDASV 250

Query: 220 RLSGLVAGEFDVVV-----NLLPEFADSVPQAKSVSGLETSVIILGV---------DNPA 265
           R+  L   E  V +     ++ P  AD   Q    +G     I   V          NP 
Sbjct: 251 RMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKIKGSNEANP- 309

Query: 266 VKDVRVRRALNMAIDRHALAESLFAGNAKVTTGQLVLPGAFGYNESLENWPYDPQGAKKL 325
           +  ++VR+AL+MA+D+  + ES++ G  ++    +  P  + Y++S+++  +DP+ AK+L
Sbjct: 310 MAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMP-PTQWSYDDSIKDAAFDPEKAKQL 368

Query: 326 IAEAG-AAGTTIDLVG---EAGRWLKDRELIEAVAAYWTEVGLKVNVEILEFSVYLDRIF 381
           + EAG   GT I L     +       + + E + + W ++G+K  +   E+  Y+ R  
Sbjct: 369 LKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWGEYIKR-- 426

Query: 382 DMGNRPDSYFVLNSNELFDADREMAFAYEPGQGGASNSD----KALGEAIRAARSEVDGE 437
             G    +  +  S +  D D  +   Y       +N      K   + I+ A++  D  
Sbjct: 427 SKGGEQGAMLIGWSGDNGDPDNWLGTLYGCDAVDGNNFSKWCYKPYDDLIKQAKATSDQA 486

Query: 438 KRKAAYAVITKKLHDEAYDVPLLNHQDIYGMSEKME 473
           KR   Y      L ++    P+ +      MS K++
Sbjct: 487 KRTELYQKAQHILKEQVPITPIAHSTVYQPMSAKVK 522