Pairwise Alignments

Query, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  131 bits (330), Expect = 5e-35
 Identities = 125/462 (27%), Positives = 197/462 (42%), Gaps = 59/462 (12%)

Query: 60  RTATGDLVPGLAADAPTQVDARTWQFKLREGIKFHNGEPF------NADAVVASVLRVID 113
           +  T ++ P LA       D  T+ F LR+G+KFH  + F      NAD V+ S+ R +D
Sbjct: 76  KPGTTEIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQLD 135

Query: 114 PANN-----------SEQMAYLGPLSGAEKVDDLAVRIITSAPD-PIL-PARMYWLKMVP 160
           P +             E M +   L    K D+  V I  S P+ P L    M +  +  
Sbjct: 136 PNHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSIYS 195

Query: 161 AAY------SKNATAIAEKPVGTGPYKFGTWDRGNSITMTANTDYWGGEPQIDDVTYRFV 214
           A Y      S     +  KP+GTGP+ F  +++   +    N DY+ G+P  D + +   
Sbjct: 196 AEYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPADALVFAIA 255

Query: 215 SEAGTRLSGLVAGEFDVVVNLLPEFADSVPQ-----AKSVSGLETSVIILGVDNPAVKDV 269
            ++  RL  L A E  V +   P+   S+ Q      + +  L T  I +   +  + DV
Sbjct: 256 IDSNVRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYLNDV 315

Query: 270 RVRRALNMAIDRHALAESLFA-GNAKVTTGQLVLPGAFGYNESLENWPYDPQGAKKLIAE 328
           RVR+A+NMA DR    + LF  GNA V       P   GYN   +N P D   A+ L+++
Sbjct: 316 RVRKAINMAFDRQTHVDQLFGKGNALVGVNPYP-PTMIGYNTHNQNPPRDLDKARALLSQ 374

Query: 329 AGA-AGTTIDLVGEAGRWLKD---RELIEAVAAYWTEVGLKVNVEILEFSVYLDR----- 379
           AG   GT I L    G    +   R   E + A   ++GLK+++ ++E++  L R     
Sbjct: 375 AGVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKNGE 434

Query: 380 --------IFDMGNRPDSYFVLNSNELFDADREMAFAYEPGQGGASNSDKALGEAIRAAR 431
                     D G+ PD++     + L   D     A + G+  A   +    E I  AR
Sbjct: 435 ADLVSTGWAGDNGD-PDNFL----SPLLSCD-----AVKSGENYARWCNPKFQELISRAR 484

Query: 432 SEVDGEKRKAAYAVITKKLHDEAYDVPLLNHQDIYGMSEKME 473
             +D ++R   Y    K   DE   + + + +    M + +E
Sbjct: 485 EVIDNDERARLYNEALKVYDDEQPWISMAHPKMFTAMRDNVE 526