Pairwise Alignments

Query, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 531 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  162 bits (409), Expect = 3e-44
 Identities = 135/511 (26%), Positives = 236/511 (46%), Gaps = 52/511 (10%)

Query: 1   MNTRILGLAAGLAVL-FASTSWAQSITVAIGSEPSTLDPQLRDDGGERQVND-NIYEALM 58
           M +++  LA  LA L  +ST  A+++       P   +PQL   G     +   +Y  L+
Sbjct: 1   MKSKLTTLALALAALTVSSTVAAKTLVYCSEGSPENFNPQLYTSGTSVDASAVPVYNRLV 60

Query: 59  A-RTATGDLVPGLAADAPTQVDARTWQFKLREGIKFHNGEPF------NADAVVASVLRV 111
             +  T +LVP LA       D + + F LR+G+KF + + F      NAD V+ S +R 
Sbjct: 61  DFKPGTTELVPSLAERWEVSDDGKVYTFHLRKGVKFQSNKSFTPTRDFNADDVIFSFMRQ 120

Query: 112 ID-----------PANNSEQMAYLGPLSGAEKVDDLAVRIITSAPDPILPARMYWL--KM 158
            D             +N E + +   ++G +KVDD  VR   + P+    A + W    +
Sbjct: 121 KDVNHPYHNVSNGSYSNFESLEFGSLITGIDKVDDHTVRFTLAHPEAPFVADLAWYFASI 180

Query: 159 VPAAYSK------NATAIAEKPVGTGPYKFGTWDRGNSITMTANTDYWGGEPQIDDVTYR 212
           + A Y+           +  +P+GTGP+K   + + + I  TA  DYW G+ ++D + + 
Sbjct: 181 LSAEYADAMLKAGTPEKVDMEPIGTGPFKLAQYQKDSRILFTAFADYWQGKSKLDRLVFS 240

Query: 213 FVSEAGTRLSGLVAGEFDVVVNLLPEFADSVPQAK--------SVSGLETSVIILGVDNP 264
              +A  R + +   E  V+    P  AD +P+ K        S +GL T  +      P
Sbjct: 241 ITPDASVRFAKIEKNECQVMP--FPNPAD-LPRMKANKDINLMSKAGLNTGFLAFNTQKP 297

Query: 265 AVKDVRVRRALNMAIDRHALAESLFAGNAKVTTGQLVLPGAFGYNESLENWPYDPQGAKK 324
            + +V+VR+AL MAI++ A+ +++F G        L+ PG +G +  L+++ YDP+ AK 
Sbjct: 298 PLDNVKVRQALAMAINKPAIIDAVFHGTG-TAAKNLLPPGVWGADSELKDYDYDPEKAKA 356

Query: 325 LIAEAG-AAGTTIDLVG---EAGRWLKDRELIEAVAAYWTEVGLKVNVEILEFSVYLDRI 380
           L+ EAG A G +++L     +       + + E + A W ++G++  +   E+  YL R+
Sbjct: 357 LLKEAGFANGVSVELWAMPVQRPYNPNAKRMAEMIQADWAKIGVQTKIVTYEWGEYLKRV 416

Query: 381 FDMGNRPDSYFVLNSNELFDADREMA--FAYEPGQGGASNSD---KALGEAIRAARSEVD 435
              G    +  +  +    D D      F      GG++++    K   + I  A+S  D
Sbjct: 417 --KGGEHQAALMGWTTATGDPDNFFGPLFTCTSANGGSNSAKWCYKPFDKIIAEAKSTTD 474

Query: 436 GEKRKAAYAVITKKLHDEAYDVPLLNHQDIY 466
            +KR A Y    + +HD+   V ++ H  I+
Sbjct: 475 RDKRVALYKEAQQMMHDQMPAV-MIAHSTIF 504