Pairwise Alignments

Query, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 505 a.a., ABC transporter substrate binding protein (dipeptide) from Agrobacterium fabrum C58

 Score =  202 bits (513), Expect = 3e-56
 Identities = 149/489 (30%), Positives = 235/489 (48%), Gaps = 27/489 (5%)

Query: 5   ILGLAAGLAVLFASTSWAQSITVAIGSEPSTLDPQL--RDDGGERQVNDNIYEALMARTA 62
           +L   +G+A   A+++    I + +  E   L+P +  R + G R + +N+ E L     
Sbjct: 14  VLAFGSGIAPANAAST---DIKIVLPEEADLLEPCMATRSNIG-RVIMENVSETLTELDV 69

Query: 63  TGD--LVPGLAADAPTQVDARTWQFKLREGIKFHNGEPFNADAVVASVLRVIDPANNSEQ 120
            G   ++P LA +   Q     W+F LR+G+KF +G+ F A  V  S  R+    N  E 
Sbjct: 70  RGKQGVMPRLA-EKWEQTGDSAWRFHLRQGVKFSDGKTFGAKDVKYSFDRIFSDKNICES 128

Query: 121 MAYLGPLSGAEKV-DDLAVRIITSAPDPILPARMYWLKMVPAAYSKNATAIAEKPVGTGP 179
             Y G +    KV DD  +        PILP  +  + +VP        A   +P+GTGP
Sbjct: 129 RRYFGGMKFDVKVVDDNTIDFKVDPVQPILPLLLSLVTIVPDG---TPLAFVREPIGTGP 185

Query: 180 YKFGTWDRGNSITMTANTDYWGGEPQIDDVTYRFVSEAGTRLSGLVAGEFDVVVNLLPEF 239
           YK   W  G  I + A  DYWG +P +   TY F ++   R + + AGE D+  ++    
Sbjct: 186 YKLSNWTPGQQIVLDARDDYWGKKPAVTKATYLFRADPAVRAAMVQAGEADLAPSI--SQ 243

Query: 240 ADSVPQAKSVSGLETSVIILGVDN--PAVKDVRVRRALNMAIDRHALAESLFAGNAKVTT 297
            D+       S L++  + L +D     + DVRVR+ALN+AIDR A   +L   +A + T
Sbjct: 244 VDATNDKTDFSYLDSETVYLRLDGNIAPLNDVRVRKALNLAIDRQAFIGTLVPQDAVLAT 303

Query: 298 GQLVLPGAFGYNESLENWPYDPQGAKKLIAEAGAAGTTID----LVGEAGRWLKDRELIE 353
             LV P   G+N  ++ +PYDP  AKKL+ EA A G  +D    ++     +    E++E
Sbjct: 304 A-LVPPTTLGWNPDVKVFPYDPDQAKKLLEEAKAGGVPVDNPITIIARTANFPNVTEIME 362

Query: 354 AVAAYWTEVGLKVN---VEILEFSVYLDRIFDMGNRPDSYFVLNSNELFDADREMAFAYE 410
           AV A   +VG KV    VE+ E  VY  + F  G  P     ++ N   D    M F Y+
Sbjct: 363 AVQAQLQDVGFKVELRFVEVAEHEVYYSKPFKEGRGPQIVAAMHDNSKGDPSFTMFFKYD 422

Query: 411 PGQGGASNSDKALGEAIRAARSEVDGEKRKAAYAVITKKLHDEAYDVPLLNHQDIYG-MS 469
                +  SDK + + I+ A S   G++R   ++ +   +HD+     LL H   Y  +S
Sbjct: 423 TNGTQSGFSDKNVDDLIKRA-SAATGDERAKLWSQLIAYVHDDLVADVLLFHMVGYSRVS 481

Query: 470 EKMEWQPRV 478
           E+++++P +
Sbjct: 482 ERLDFKPTI 490