Pairwise Alignments

Query, 494 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 497 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  145 bits (365), Expect = 4e-39
 Identities = 118/387 (30%), Positives = 179/387 (46%), Gaps = 14/387 (3%)

Query: 20  AASAAWAQSITIAIGSEPSTLDPQLRDDGGERQVND-NIYETLMARTPTGELVPGLAAQP 78
           A + A   ++TI +  EP  LDP         ++   NI+ETL      G + P LA   
Sbjct: 24  ARAQAGKNTLTIGMPLEPPGLDPTTGAASAIAEITQYNIFETLTKVNADGSVTPMLAESW 83

Query: 79  PKQVDATTWQFKLRDGVKFHNGEPFNADAVVASVSRVIDPANNSEQMAYFGTIKTAEKVD 138
               D  T+ FKLR GV+F N +PFNA  V  S  R     + ++   +F  I T   +D
Sbjct: 84  SSSPDMKTFVFKLRKGVRFENDQPFNAHTVKFSFDRAGGAKSTNKDKRFFSEIGTV-VLD 142

Query: 139 DLTVNLVTTGPDPILPSRMYWMKMIAPGYAKDGDL-AGAPVGTGPYKFDSWNRGTDLKLV 197
           + TV + +T P+P LP  M           K  D  A APVGTGPYK  +W RG    LV
Sbjct: 143 EYTVGVNSTLPNPDLPF-MLGQSTACIVEPKSADTNATAPVGTGPYKLSAWQRGASCTLV 201

Query: 198 ANADYWGGE-PQIDDVTYRFVTEPGTRLSGLLSGEFDVI----TNLLPEFTTNVPKFAAV 252
            +  Y      ++    +RF+++   + + L++ + D+     T  + +F  N P+F  +
Sbjct: 202 KSPSYRDQNLAKVPKFVFRFMSDTAAQTAALMANDIDIFPRAGTRSVAQFKGN-PRFQVI 260

Query: 253 PGLETSVFVLGTDN--EVTKDPKVREALNLAIDRKAMAEGLFMGYATLAKGSHINPAAFG 310
                   +L  +N  +   D +VR A+  AIDR A+ +G   G+     GSH    A G
Sbjct: 261 EVGTRGKVILTINNRKKPLDDVRVRRAILAAIDRNAIIQGAADGFGK-PIGSHYAMGAPG 319

Query: 311 FNEKLEHYPHDIEKARALIKEAGAEGKPLVVVGESGRWLKDREQIEAVAGYWAETGLNVT 370
           F +     P DIEKA+ L+ EAG +  PL +  +       R+  E +A   A+ G+NV 
Sbjct: 320 FVDTTAMNPFDIEKAKKLLAEAGVK-TPLELRLQLPPPSYARQGGEMIAAQLAQIGINVK 378

Query: 371 TDIQEFSQYLDSLMGDGPRPDAIFIAN 397
               E++Q+L    G     D   +A+
Sbjct: 379 IQNVEWAQWLSGTFGGAHDFDLTMVAH 405