Pairwise Alignments

Query, 494 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 527 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  138 bits (348), Expect = 4e-37
 Identities = 114/410 (27%), Positives = 180/410 (43%), Gaps = 39/410 (9%)

Query: 9   AGVVMLLASTLAASAAWAQSITIAIGSEPSTLDPQLRDDGGERQVNDNIYETLMARTPTG 68
           A   +L A    +  A AQ+I IA   +  +LDP   ++  +  V  N+YETL+ R    
Sbjct: 8   AAAAVLCALGAVSMVASAQTIRIANQGDALSLDPHSLNESLQLSVTANVYETLVGRNKDL 67

Query: 69  ELVPGLAAQPPKQVDATTWQFKLRDGVKFHNGEPFNADAVVASVSRVIDPANNSEQMAYF 128
            L P L A   KQ     W+F+LR GV FH+G PF AD VV S +R     + S+  A  
Sbjct: 68  SLAP-LLATSWKQTSPNVWRFELRKGVVFHDGTPFTADDVVFSFARA--QGDGSDMRATL 124

Query: 129 GTIKTAEKVDDLTVNLVTTGPDPILPSRMYWMKMIAPGYAKDGDLAGAPV---------- 178
             IK   KV DL V + T GP PILP  +    +++  + ++   A  PV          
Sbjct: 125 SDIKAVRKVGDLAVEIETNGPFPILPDVISLTMIMSKKWCEENQ-ATKPVDRRKGIENTA 183

Query: 179 -----GTGPYKFDSWNRGTDLKLVANADYWGG-EPQIDDVTYRFVTEPGTRLSGLLSGEF 232
                GTGP++              N  YWG  +    +V +  +  P TR++ L+SGE 
Sbjct: 184 SFKANGTGPFRVRERQPNVRTVFTRNGTYWGKIDGNAQEVIFTPIANPATRVAALVSGEV 243

Query: 233 DVITNLLPEFTTNV---PKFAAVPGLETSVFVLGTDNE-------------VTKDPKVRE 276
           DV+  +  +    +   P    + G E     LG D +               KD +VR+
Sbjct: 244 DVMEPVPVQDIARINAAPNARVITGPEMRTIFLGMDQKRDELQYSNVKGKNPFKDKRVRQ 303

Query: 277 ALNLAIDRKAMAEGLFMGYATLAKGSHINPAAFGFN-EKLEHYPHDIEKARALIKEAG-A 334
           A   AID   +   +  G A+      + P   G+  E+ +  P+D+E A+ L+ EAG  
Sbjct: 304 AFYQAIDIAGIQRTVMRG-ASRPTALLVGPGINGWTAEQDKRLPYDVEAAKKLLTEAGYP 362

Query: 335 EGKPLVVVGESGRWLKDREQIEAVAGYWAETGLNVTTDIQEFSQYLDSLM 384
            G  + +   + R++ D +  ++VA   A+ G+ +    +    Y   ++
Sbjct: 363 NGFEVSLNCPNDRYVNDGQICQSVASNLAKIGVKINLVAETKGTYFPKVL 412