Pairwise Alignments

Query, 494 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 497 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  139 bits (350), Expect = 2e-37
 Identities = 118/389 (30%), Positives = 184/389 (47%), Gaps = 17/389 (4%)

Query: 9   AGVVMLLASTLAASAAWAQSITIAIGSEPSTLDPQLRDDGGE--RQVNDNIYETLMARTP 66
           A +  L   T+A +     ++ I +  EP+ LDP  +  G E    V   ++ETL     
Sbjct: 13  AALTPLALPTIALAQRKKDALVIGLTLEPTGLDPTAKA-GAEIAEVVLYTVFETLTKINS 71

Query: 67  TGELVPGLAAQPPKQVDATTWQFKLRDGVKFHNGEPFNADAVVASVSRVIDPANNSEQMA 126
            G + P LA       D  T+ FKLR GVKF NGEPFNA +V  S  R     + ++   
Sbjct: 72  DGGVTPLLAESWEVSPDLKTYTFKLRRGVKFQNGEPFNAQSVKFSFDRAAAANSTNKDKR 131

Query: 127 YFGTIKTAEKVDDLTVNLVTTGPDPILPSRMYWMKMIAPGYAKDGDLAGAPVGTGPYKFD 186
            F  I T + VD+ TV L+    +P L   +     I          A  PVGTGPY+ D
Sbjct: 132 TFTNIAT-QVVDEHTVVLINKEIEPDLLFLLGQASAILVEPKSVETNATKPVGTGPYRLD 190

Query: 187 SWNRGTDLKLVANADYWGGEP--QIDDVTYRFVTEPGTRLSGLLSGEFDV-----ITNLL 239
           +W +G+ + ++A  D W G    QI   T+RF++EP  + + LLS + D+     ++  L
Sbjct: 191 NWAKGSSI-VLAKWDGWRGADTVQIRKATFRFISEPAAQTAALLSNDIDLFPHASVSRSL 249

Query: 240 PEFTTNVPKFAAV--PGLETSVFVLGTDNEVTKDPKVREALNLAIDRKAMAEGLFMGYAT 297
            +F  N  +F  V    L  ++  +    +   D +VR A++ AIDRKA+ +    G   
Sbjct: 250 SQF-QNDKRFQIVFNASLGKTILAINNKRKPLDDVRVRRAISAAIDRKAVIDAAVDGRG- 307

Query: 298 LAKGSHINPAAFGFNEKLEHYPHDIEKARALIKEAGAEGKPLVVVGESGRWLKDREQIEA 357
           +  GSH  P   G+ +     P++IEKA+ L+ EAG +  PL +          R+  E 
Sbjct: 308 VPIGSHYVPGLPGYVDTTGVNPYNIEKAKKLLAEAGVK-TPLELELVLPPPPYARQGGEL 366

Query: 358 VAGYWAETGLNVTTDIQEFSQYLDSLMGD 386
           +A   A+ G+       E++Q++    G+
Sbjct: 367 IAAQLAKIGIVAKIQNVEWAQWISGTYGN 395