Pairwise Alignments

Query, 494 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  169 bits (429), Expect = 2e-46
 Identities = 142/521 (27%), Positives = 254/521 (48%), Gaps = 55/521 (10%)

Query: 14  LLASTLAASAAWAQSITIAIGSEPSTLDPQLRDDGGERQVNDNIYETLMARTPTGELVPG 73
           LLA+ ++ASA   Q+++I      S++DP+L +  G+R +  + +++++     G+L P 
Sbjct: 12  LLATGVSASA---QTLSIGFADPVSSVDPELNNHAGDRSLALHFWDSIINSRDGGKLEPA 68

Query: 74  LAAQPPKQVDATTWQFKLRDGVKFHNGEPFNADAVVASVSRVIDPANNSEQMAYFGTIKT 133
           LA+   K +D  TW+FKLR  +K+ +G PF+AD +V S  R  +   +    +Y G ++T
Sbjct: 69  LASSW-KALDDKTWEFKLRTDIKWQDGTPFSADDIVFSFQRSRNVPGSVA--SYSGALRT 125

Query: 134 AEKV---DDLTVNLVTTGPDPILPSRMYWMKMIAP-----GYAKDGDLAGAPVGTGPYKF 185
            E V   D  T+ + T  P+P+LP  +  + +++         +D +   A VGTGPYKF
Sbjct: 126 VESVTAKDPATLIVKTNTPNPMLPLEIASIYIVSKHVGEKSKTEDYNAGRAVVGTGPYKF 185

Query: 186 DSWNRGTDLKLVANADYWGGEPQIDDVTYRFVTEPGTRLSGLLSGEFDVITNLLPEFTTN 245
            S+  G       N  Y+G +P  + V YRF+     R + LL+G+ DVI  +       
Sbjct: 186 VSYVPGDRTVFERNPGYYGPKPLWEKVNYRFINNGAARTAALLAGDVDVIDKVAVTDVEK 245

Query: 246 VPKFAAV-----PGLET----SVFVLGTDNEVTK------------DPKVREALNLAIDR 284
           + K   V     PGL        F  G +  +T             D +VR+AL+LAI+R
Sbjct: 246 LRKDPKVSVYTYPGLRVLLLQPTFKAGPNEFITDNAGKPLEKNPLLDVRVRQALSLAINR 305

Query: 285 KAMAEGLFMGYATLAKGSHINPAAFGFNEKLEHYPHDIEKARALIKEAG-AEGKPLVVVG 343
           KA+ + +  G  T A    +   +FG+N  ++   ++ E+A+ L+ EAG  +G  + +  
Sbjct: 306 KAIVDRVLQGTVTEA-NQWMPKGSFGYNPDVKDIAYNAEQAKKLLAEAGFPQGFQIAIHV 364

Query: 344 ESGRWLKDREQIEAVAGYWAETGLNVTTDIQEF---------SQYLDSLM--GDGPRPDA 392
              R+ +  E ++AVA +W+  G+    ++  +         ++Y  S++  G+G     
Sbjct: 365 PGDRYPQAPETVQAVAQFWSRIGVKTKVEVVPWAVYSGRANKNEYAVSVIAWGNGTGEAG 424

Query: 393 IFIANSNELLDADREMSFIYHKDGAAASNSDAEMATMIEAARVETDAAKRKALYDDIQKK 452
             +  +    DA R        +    SN   + A  ++AA VE DA +R+A++    K 
Sbjct: 425 YGLLQTLTTPDAKRGRG---SNNWGRYSNESVDKA--LDAATVEFDAKRREAIFRHAAKL 479

Query: 453 GHDLNYTVPLFNLQDIYGMSERMEWQPRVDAKLMVSEMKVT 493
             D    +PL++ Q+I+   + ++  P +  +   + M+VT
Sbjct: 480 VTDDVGQIPLYHYQNIWAAKKGLKVVPLLSDR--TTAMQVT 518