Pairwise Alignments

Query, 494 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  160 bits (406), Expect = 8e-44
 Identities = 137/521 (26%), Positives = 235/521 (45%), Gaps = 51/521 (9%)

Query: 12  VMLLAST--LAASAAWAQSITIAIGSEPSTLDPQLRDDGGERQVNDNIYETLMARTPTGE 69
           V+LL S   L A    A+++TI +    +++DP   +      +   I++ L  RT  G 
Sbjct: 6   VLLLTSLIGLVAQPVMAKNLTIGLSGTVTSIDPHFYNASPNNAIAMQIFDRLTERTAEGR 65

Query: 70  LVPGLAAQPPKQVDATTWQFKLRDGVKFHNGEPFNADAVVASVSRVIDPANNSEQMAYF- 128
           LV GLA +    V  T W+F LRDGVK+H+G+PF +D V+ ++ R     N+      F 
Sbjct: 66  LVEGLATKWDT-VSETKWRFALRDGVKWHDGKPFTSDDVIFTLDRAGSVPNSPGGFGGFM 124

Query: 129 GTIKTAEKVDDLTVNLVTTGPDPILPSRMYWMKMIAPGYAKDGDLAG-----APVGTGPY 183
             I + E   D  V + T  P P LP  +  + +++    +  D A      A +GTG +
Sbjct: 125 RNIASVEADGDNAVIISTKAPAPTLPGDLANIAIVSRHAGEGADTADYNSGKAAIGTGAF 184

Query: 184 KFDSWNRGTDLKLVANADYWGGEPQIDDVTYRFVTEPGTRLSGLLSGEFDVI-----TNL 238
           +  ++ +G ++ L  N D+WG +   D  TYR ++    R +  L+G+ DVI     T++
Sbjct: 185 RLTTFKQGIEVGLERNPDWWGKKVAWDHATYRMISSASARTTAALAGDVDVIDAPAATDI 244

Query: 239 LPEFTTNVPKFAAVPGLET------------SVFVLG-----TDNEVTKDPKVREALNLA 281
               TT    F + PGL                FV G      DN    DP+VR AL+ A
Sbjct: 245 ARFKTTANLSFVSTPGLRVIYLAPSTSGDAWKAFVKGPKGEALDNNPLADPRVRNALSEA 304

Query: 282 IDRKAMAEGLFMGYATLAKGSHINPAAFGFNEKLEHYPHDIEKARALIKEAG-AEGKPLV 340
           I+R+ + + +  G AT A G  +   AF +   ++    D   A+ L+ +AG  +G  L 
Sbjct: 305 INREGIVDKIMEGTAT-ASGQWLPKGAFSYTPDIQPPKPDAAGAKKLLADAGYPDGFQLT 363

Query: 341 VVGESGRWLKDREQIEAVAGYWAETGLNV-------TTDIQEFSQYLDSLMGDGPRPDAI 393
           V   + R+      ++AVA  W   G+         TT     S++   L+G G   +A 
Sbjct: 364 VHVPNDRYPNAPAVVQAVAQMWTRIGVKTNVEALPWTTFSSRKSEFAMKLLGLG---NAT 420

Query: 394 FIANSNELLDADREMSFIYHKDGAAASN----SDAEMATMIEAARVETDAAKRKALYDDI 449
           + A+S  +      +  +  K G  A+N    S+  +  ++  A +  D   R+A   + 
Sbjct: 421 YDASSMLV----NVLGTVDPKRGLGAANDSGYSNPALDDLVSKAMMIYDDKAREAALIEA 476

Query: 450 QKKGHDLNYTVPLFNLQDIYGMSERMEWQPRVDAKLMVSEM 490
            K        +PL+   + + + + + + PR+D + +  ++
Sbjct: 477 VKVAITDGAIIPLYQQSNAWVLRKGLNYAPRIDERTLAKDV 517