Pairwise Alignments

Query, 494 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 535 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  129 bits (324), Expect = 3e-34
 Identities = 131/478 (27%), Positives = 203/478 (42%), Gaps = 44/478 (9%)

Query: 10  GVVMLLASTL-AASAAWAQSITIAIGSEPSTLDPQLRDDGGERQVNDNIYETLMARTPTG 68
           GVV L    L AA  A   + T+ I SEP  L            ++  + E L+      
Sbjct: 20  GVVSLPGLKLNAAEPASGGTATLLISSEPPVLTTIAHTAYNSVYISPKVTEGLLTYDFDL 79

Query: 69  ELVPGLAAQPPKQVDATTWQFKLRDGVKFHNGEPFNADAVVASVSRV--IDPANNSEQMA 126
              P LA       D   + F LR GVK+H+G+PF +  V  S+S +  + P   +    
Sbjct: 80  NPKPLLAKSWDVSADGLRYTFNLRPGVKWHDGKPFTSADVAFSISTIKEVHPRGRNT--- 136

Query: 127 YFGTIKTAEKVDDLTVNLVTTGPDPILPSRMYWMKM-IAPGYAKDGDLAG------APVG 179
            F  +   E  ++LT  LV + P P L + +   +  I P +  +G          AP+G
Sbjct: 137 -FLNLTAVETPNELTAVLVLSKPAPYLITALAAAETPIVPKHLYEGTKVTENPVNLAPIG 195

Query: 180 TGPYKFDSWNRGTDLKLVANADYWGG-EPQIDDVTYRFVTEPGTRLSGLLSGEFDVITNL 238
           TGP+KF  W RG+ +    NADYW    P +D +  RF+ +   R   + +GE D+  + 
Sbjct: 196 TGPFKFKEWVRGSHIVFERNADYWDAPRPYLDRLIVRFIPDASARAIAIETGEIDLAPS- 254

Query: 239 LPEFTTNVPKFAAVPGL-----------ETSVFVLGTDNEVTKDPKVREALNLAIDRKAM 287
            P   +++ +   +P L             S      + +V KD +VR A    IDR  +
Sbjct: 255 TPVAYSDLDRLKELPSLGFDTNGYQYTNSISRVEFNLEKDVFKDVRVRRAFAHVIDRNVI 314

Query: 288 AEGLFMGYATLAKGSHINP-AAFGFNEKLEHYPHDIEKARALIKEAG-AEGKPLVVVGES 345
              +  GY     G  INP     F   L+ YP D++ A AL+ EAG   G   +    +
Sbjct: 315 FNTVNFGYGATIAGP-INPKLTKWFVNDLKTYPIDLKAAEALLDEAGYKRGADGIRFKLN 373

Query: 346 GRWLKDREQIEAVAGY----WAETGLNVTTDIQEFSQYLDSLMGDGPRPDAIFIANSNEL 401
             ++   E     A Y     A+ G++VT   Q+F+ Y   +  D  R         + L
Sbjct: 374 LDYVPSTEAYPRGADYIRQALAKVGVDVTVRTQDFATYTKRIYTD--RDFDFAYEGMSNL 431

Query: 402 LDADREMSFIY----HKDGAAASN----SDAEMATMIEAARVETDAAKRKALYDDIQK 451
            D    +  +Y     K G   SN    S+ ++  ++EAA +E D  KR A + +IQ+
Sbjct: 432 FDPTVGVQRLYWSKNFKKGVPFSNGAAYSNPKVDALLEAAAIEIDPDKRVAQWKEIQQ 489