Pairwise Alignments

Query, 494 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 525 a.a., peptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  148 bits (374), Expect = 4e-40
 Identities = 131/517 (25%), Positives = 235/517 (45%), Gaps = 40/517 (7%)

Query: 7   LTAGVVMLLASTLAASAAWAQSITIAIGSEPSTLDPQLRDDGGERQVNDNIYETLMARTP 66
           L AGV +L+ +  AA    A+ ITIA  S+  + +P +  DG    V  +I E L+    
Sbjct: 16  LLAGVALLVTANFAA----ARDITIAQSSDLRSSNPGVNRDGNTDGVILHIVEGLVGYNN 71

Query: 67  TGELVPGLAAQPPKQVDATTWQFKLRDGVKFHNGEPFNADAVVASVSRVIDPANNSEQMA 126
            GE+ P LA       D   + FKLR  VKFHNG+P  A+ VV + +R + P      + 
Sbjct: 72  AGEVKPLLAESVEVAPDGLAYTFKLRKDVKFHNGKPLTAEDVVWNWTRYLKPETKWACLN 131

Query: 127 YFGT-----IKTAEKVDDLTVNLVTTGPDPILPSRMY-----WMKMIAP-GYAKDGDLAG 175
            F       +   +  D  TV +    P  +    M      +  MI+P   A DG    
Sbjct: 132 DFAEGGAAHVTAVKATDASTVQITLEKPSGVFLGLMSRPECGYTGMISPESVAADGSFV- 190

Query: 176 APVGTGPYKFDSWNRGTDLKLVANADY-------------WGGEPQIDDVTYRFVTEPGT 222
            P+GTGP+++D W +G  ++L   ADY                 P  D + +  + +  T
Sbjct: 191 KPIGTGPFQWDEWKKGEYIRLAKFADYISPANDGKPDGMVGSKRPLADGIKFMVIPDAST 250

Query: 223 RLSGLLSGEFD---VITNLLPEFTTNVPKFAAVPGLET--SVFVLGTDNEVTKDPKVREA 277
             +GL SG  D   +  +L+PEF TN  K   +       ++F + T ++V  +P VR A
Sbjct: 251 VKAGLESGVLDTAEISPDLIPEFKTN-DKMQLIVSRNNGKNLFYIQTRDKVLSNPGVRRA 309

Query: 278 LNLAIDRKAMAEGLFMGYATLAKGSHINPAAFGFNEKLEHYP-HDIEKARALIKEAGAEG 336
           + +A+D   +      G    A GS ++  +  ++E  +  P +D+E A+  ++ AG +G
Sbjct: 310 MAMALDLDELVAAASNGTGE-ANGSMVSQDSVYYDETQKRRPAYDVEAAKKELEAAGYKG 368

Query: 337 KPLVVVGESGRWLKDREQIEAVAGYWAETGLNVTTDIQEFSQYLDSLMGDGPRPDAIFIA 396
           +P+ ++      +              + GLNV  ++ +++  +D       +   I  +
Sbjct: 369 EPISIIANKRGNVPSFPAAVMAQAMMQQAGLNVQIEVLDYATQVDRRRSGNYQ--VISQS 426

Query: 397 NSNELLDADREMSFIYHKD-GAAASNSDAEMATMIEAARVETDAAKRKALYDDIQKKGHD 455
            +  L  A     ++ +KD  A+    D +   +++AA VE D AKR+ ++D+  +    
Sbjct: 427 VAPRLDPALMYAFYVGNKDKNASLMWDDPKAIELMKAAYVEADQAKRQRVFDEFHELMLK 486

Query: 456 LNYTVPLFNLQDIYGMSERMEWQPRVDAKLMVSEMKV 492
               + L+++ D++G +++++ QP   +   + E+ V
Sbjct: 487 EMPGIFLYDMVDVWGATKKLKGQPVWQSNARLWEVSV 523