Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  232 bits (591), Expect = 1e-65
 Identities = 116/283 (40%), Positives = 175/283 (61%), Gaps = 4/283 (1%)

Query: 18  PRGRISELWH----DKTAAIGLALILLIVFLALFAPLIAPYDPAAQSIMARLKPPVWMER 73
           P G + E W     ++ A IGL  I+L++ +A+FAP IAP+ P   +    L+PP W + 
Sbjct: 16  PPGPLREFWAAFSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQPPAWQQG 75

Query: 74  GTWEHLLGTDNLGRDVLSRIIWGARATLTIGAVTCLLAATLGTVIGLWAGFMGGRTDSIL 133
           G+  +LLGTD +GRD+LSR+++GAR +L+IG     L+  +G V+GL AGF  G  +  +
Sbjct: 76  GSTSYLLGTDAIGRDILSRLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIAI 135

Query: 134 MRLVDIQVSFPGILLILLVVAVLGPGVWTLVAVLSVTNWMVYARLVRGIVSSTRQTPYVE 193
           MRL+DI ++ P +LL +++VA+LGPG+   +  +++     Y R+ R  V +     YV 
Sbjct: 136 MRLMDIVLTLPSLLLAIVIVAILGPGLVNAMLAVAIVVLPHYVRITRAAVIAEVSRDYVT 195

Query: 194 AAEVIGCRPARVIFRHILPNIVSPLMTLAILEFTNIVLAEAAVSFLGFGVQPPATSWGLD 253
           AA V G    R++FR +LPN  +PL+  A L  +  +L  AA+ FLG G QPP+  WG  
Sbjct: 196 AARVSGAGTLRLMFREVLPNCAAPLIVQASLGISTAILDAAALGFLGLGAQPPSPEWGTM 255

Query: 254 VASGRDYLFIAWWLVTFPGLAIVATVLSINLFANWLRVTTDPE 296
           +A  R+++  AWW+VTFPGLAI+  VL+ NL  + LR   DP+
Sbjct: 256 LADAREFVLRAWWVVTFPGLAILMAVLAFNLLGDGLRDALDPK 298