Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  190 bits (483), Expect = 3e-53
 Identities = 113/300 (37%), Positives = 166/300 (55%), Gaps = 9/300 (3%)

Query: 2   AASASAASPTPVGTRVPRGRISELWHDKTAAI-GLALILLIVFLALFAPLIAPYDPAAQS 60
           +AS  AA P PV    P      ++    AAI G+A++L+++ +A+  P + P DP  + 
Sbjct: 12  SASQPAARP-PVRVEHPGMEALRMFLRNPAAIAGMAMLLIVLAVAIAGPWVYPADPF-EI 69

Query: 61  IMARLKPPVWMERGTWEHLLGTDNLGRDVLSRIIWGARATLTIGAVTCLLAATLGTVIGL 120
             A L PP       W   LG+D LGRDVL+ +I+G RATL +GAV  LL+  +G  +G 
Sbjct: 70  KAAPLTPP--FSEDAW---LGSDYLGRDVLTALIYGGRATLLVGAVAALLSVLIGITLGA 124

Query: 121 WAGFMGGRTDSILMRLVDIQVSFPGILLILLVVAVLGPGVWTLVAVLSVTNWMVYARLVR 180
           +AG+ GG+ D+ LM+L +     P +L  ++VV +  P + T+   + + +W   ARL R
Sbjct: 125 FAGYYGGKIDAALMKLTEFFQVLPALLFAMVVVTLFSPTLVTVTLAIGIVSWTGTARLTR 184

Query: 181 GIVSSTRQTPYVEAAEVIGCRPARVIFRHILPNIVSPLMTLAILEFTNIVLAEAAVSFLG 240
                 R   +V A   IG   AR+I++ ILPN + PL+  A L     +L EA +SFLG
Sbjct: 185 AEFMKYRGLEFVRAERAIGAGDARIIWKVILPNALPPLVVSATLAIGAAILFEAGLSFLG 244

Query: 241 FGVQPPATSWGLDVASGRDYLFIAWWLVTFPGLAIVATVLSINLFANWLRVTTDPEEREK 300
            G  P   SWGL + S R Y+   WW V FPG AI  TVL+++L  + L    +P+ RE+
Sbjct: 245 LG-DPNQMSWGLMIGSSRQYVLSCWWAVAFPGAAIFITVLAVSLIGDGLNDALNPKLRER 303