Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  222 bits (565), Expect = 1e-62
 Identities = 120/281 (42%), Positives = 170/281 (60%), Gaps = 14/281 (4%)

Query: 32  AIGLALILLI-VFLALFAPLIAPYDP---AAQSIMARLKPPVWMERGTWEHLLGTDNLGR 87
           AI  ALI L+ V  A+FA  ++P++P   AA  +     PP W   G+ ++LLGTD+ GR
Sbjct: 23  AIAAALIALVCVVCAVFAGWVSPHNPFDLAALELGDARLPPAWSAEGSSKYLLGTDDQGR 82

Query: 88  DVLSRIIWGARATLTIGAVTCLLAATLGTVIGLWAGFMGGRTDSILMRLVDIQVSFPGIL 147
           D+LS +I+GAR +L +G V+ +L+  +G V+GL AGF GG  DS LMR+ D+ +SFP IL
Sbjct: 83  DILSAVIYGARISLIVGLVSVVLSVVVGVVLGLLAGFFGGWLDSFLMRVCDVMLSFPPIL 142

Query: 148 LILLVVAV---LGPGV------WTLVAVLSVTNWMVYARLVRGIVSSTRQTPYVEAAEVI 198
           + LL+  V   L PG         L+  +S+T W+ YAR VRG     R   YV+AA V 
Sbjct: 143 VALLIAGVGRALFPGAHESLAFGVLIVSISLTGWVQYARTVRGSTLVERNKEYVQAARVT 202

Query: 199 GCRPARVIFRHILPNIVSPLMTLAILEFTNIVLAEAAVSFLGFGVQPPATSWGLDVASGR 258
           G  P R++ RH+LPN++ P+  LA ++    ++ EA +SFLG GV P + S G  ++ G 
Sbjct: 203 GVAPMRIMLRHVLPNVLGPVTVLATIQVATAIITEATLSFLGVGVPPTSPSLGTLISIGN 262

Query: 259 DYLFIA-WWLVTFPGLAIVATVLSINLFANWLRVTTDPEER 298
            YLF   WW+  FPGL +V   LS+NL  +WLR   +P  R
Sbjct: 263 QYLFSGEWWITVFPGLMLVLIALSVNLLGDWLRDALNPRLR 303