Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 316 a.a., peptide transport system permease from Sinorhizobium meliloti 1021

 Score =  208 bits (529), Expect = 2e-58
 Identities = 119/316 (37%), Positives = 172/316 (54%), Gaps = 18/316 (5%)

Query: 1   MAASASAASPTPVGTRVPRGRISELW----HDKTAAIGLALILLIVFLALFAPLIAP--- 53
           M+   S   P    +   R R S++W    H KTA    AL+ +++  ALFAPLIAP   
Sbjct: 1   MSIQTSQTPPVTRPSLFQRLRQSDVWWSFTHSKTAMFSAALLAILILTALFAPLIAPQNP 60

Query: 54  YDPAAQSIMARLKPPVWMERGTWEHLLGTDNLGRDVLSRIIWGARATLTIGAVTCLLAAT 113
           YD AA  +     PPVW E G W +LLGTD  GRD+LS I++G R ++ IG  +  L+  
Sbjct: 61  YDGAALDMWKAELPPVWEEGGEWPYLLGTDTQGRDMLSAILYGTRISIVIGIASVALSLL 120

Query: 114 LGTVIGLWAGFMGGRTDSILMRLVDIQVSFPGILLILLVVAVLGP----------GVWTL 163
           +G   GL AG+ GG  D++LMR  D+ +S P IL+ +LV  V+                L
Sbjct: 121 IGMSAGLIAGYFGGFIDNLLMRFGDVTLSIPTILVAILVSTVVRQMLPVSLREVGASAVL 180

Query: 164 VAVLSVTNWMVYARLVRGIVSSTRQTPYVEAAEVIGCRPARVIFRHILPNIVSPLMTLAI 223
           +  +S++ W+ YAR VR          YV AA +IG    R++  HILPN ++P+M  A 
Sbjct: 181 ILAISLSAWVQYARTVRAQAIVETGKDYVSAARLIGVPARRIMANHILPNTLTPIMVAAT 240

Query: 224 LEFTNIVLAEAAVSFLGFGVQPPATSWGLDVASGRDYLFI-AWWLVTFPGLAIVATVLSI 282
           L F   +L EA +SFLG G+ P   S G  +  G  +LF  +WW+V FP + +   V+++
Sbjct: 241 LNFGMAILTEATLSFLGIGMPPSQPSLGTLIRIGNQFLFSGSWWIVLFPVIQLCLLVVAV 300

Query: 283 NLFANWLRVTTDPEER 298
           N+  +WLR   +P+ R
Sbjct: 301 NMLGDWLRDALNPKLR 316