Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 315 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  214 bits (544), Expect = 3e-60
 Identities = 117/314 (37%), Positives = 183/314 (58%), Gaps = 6/314 (1%)

Query: 1   MAASASAASPTPVGTRVPRGRISELWHDKTAAIGLAL-ILLIVFLALFAPLIAPYDPAAQ 59
           M+A+A   S     T+V R +I  L      A+   + +LL+V  A+F P +        
Sbjct: 1   MSATAMTTSADTPETKVSRFQILRLISRNWLALAAVIFLLLVVACAVFGPWLMGDLIDKP 60

Query: 60  SIMARLKPPVWMERGTWEHLLGTDNLGRDVLSRIIWGARATLTIGAVTCLLAATLGTVIG 119
           +  AR   P  + +G W ++LG D LGR +L+R++ GA+ T+ I       +  +G ++G
Sbjct: 61  NFRARNMAPFSLSQG-WTYVLGADTLGRSLLARLVVGAQNTIGIAFFAVFCSVVIGGMLG 119

Query: 120 LWAGFMGGRTDSILMRLVDIQVSFPGILLILLVVAVLGPGVWTLVAVLSVTNWMVYARLV 179
           L AG+  G   +++MR  DI +SFP +LL L+V+  LGP V  L+ VL++T   +Y R  
Sbjct: 120 LIAGYSRGAAGTMIMRGADIVMSFPSLLLALIVLFSLGPSVTNLILVLAITRVPIYLRTT 179

Query: 180 RGIVSSTRQTPYVEAAEVIGCRPARVIFRHILPNIVSPLMTLAILEFTNIVLAEAAVSFL 239
           R  V   R+  +V AA  +G    R++FRHI P ++  L+T+  ++F  +VLAE+++SFL
Sbjct: 180 RAEVLEVRERMFVSAAVALGANHTRILFRHIAPIVLPTLVTIGAIDFATVVLAESSLSFL 239

Query: 240 GFGVQPPATSWGLDVASGRDYLFIAWWLVTFPGLAIVATVLSINLFANWLRVTTDPEERE 299
           G G+Q P  +WG  VA+GR YL  AWW+  +PGLAI+ T LS+N+ ++W R   DP++R 
Sbjct: 240 GLGIQAPEFTWGAMVATGRGYLSTAWWIAFWPGLAILLTTLSLNILSSWWRTYADPQQR- 298

Query: 300 KRFARAEAARRRRG 313
               R E AR ++G
Sbjct: 299 ---WRIELARSKKG 309