Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  228 bits (580), Expect = 2e-64
 Identities = 114/277 (41%), Positives = 177/277 (63%), Gaps = 6/277 (2%)

Query: 25  LWHDKTAAIGLALILLIVFLALFAPLIAPYDPAAQSIMARLKPPVWMERGTWEHLLGTDN 84
           L+ ++ + IG+ L+++IV +ALFAPLIAPYDP  Q+I  RL+PP      + E  LGTD 
Sbjct: 19  LFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPP------SAEFWLGTDT 72

Query: 85  LGRDVLSRIIWGARATLTIGAVTCLLAATLGTVIGLWAGFMGGRTDSILMRLVDIQVSFP 144
            GRDVLSR+I+G R +L +G V  ++A  +G+ +G+ AG++GG TD ++   VD+ +SFP
Sbjct: 73  YGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFP 132

Query: 145 GILLILLVVAVLGPGVWTLVAVLSVTNWMVYARLVRGIVSSTRQTPYVEAAEVIGCRPAR 204
            +LL L+V A+LG  +  L+  +++T    + R+ R    + +Q  +VEA   +G  P R
Sbjct: 133 TLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGR 192

Query: 205 VIFRHILPNIVSPLMTLAILEFTNIVLAEAAVSFLGFGVQPPATSWGLDVASGRDYLFIA 264
           ++  HILPN++S ++ L  L     +  EA++SF+G GV PPA +WG  +  G + +  A
Sbjct: 193 LMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDA 252

Query: 265 WWLVTFPGLAIVATVLSINLFANWLRVTTDPEEREKR 301
           WWL  FP LAI+ TVL+++L  + LR   DP+ R +R
Sbjct: 253 WWLTVFPSLAILLTVLALSLLGDALRDANDPKTRSER 289