Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  242 bits (618), Expect = 7e-69
 Identities = 128/297 (43%), Positives = 181/297 (60%), Gaps = 5/297 (1%)

Query: 4   SASAASPTPVGTRVPRGRISELWH----DKTAAIGLALILLIVFLALFAPLIAPYDPAAQ 59
           S S ASP       P     E W     +K A +GLA + L+VF ALFAP +AP+DP+ Q
Sbjct: 8   SVSPASPVDQSLLYP-SPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQ 66

Query: 60  SIMARLKPPVWMERGTWEHLLGTDNLGRDVLSRIIWGARATLTIGAVTCLLAATLGTVIG 119
                L PPVW+E GTW+ +LGTD LGRD+LSR+I GAR +L IG  + +++   G ++G
Sbjct: 67  YRDFLLTPPVWLEGGTWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLG 126

Query: 120 LWAGFMGGRTDSILMRLVDIQVSFPGILLILLVVAVLGPGVWTLVAVLSVTNWMVYARLV 179
           L AGF        +MRL+D+ ++ P +LL + +VA+LGPG+   V  +++ +   Y RL 
Sbjct: 127 LLAGFFPQLLGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLT 186

Query: 180 RGIVSSTRQTPYVEAAEVIGCRPARVIFRHILPNIVSPLMTLAILEFTNIVLAEAAVSFL 239
           R  V       YV AA + G    R++F  +LPN ++PL+  A L F++ +L  AA+ FL
Sbjct: 187 RAAVMGELNRDYVTAARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFL 246

Query: 240 GFGVQPPATSWGLDVASGRDYLFIAWWLVTFPGLAIVATVLSINLFANWLRVTTDPE 296
           G GVQPP   WG  +AS RDY+  AWW+V+ PGL I+ +VL+INL  + LR   DP+
Sbjct: 247 GLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPK 303