Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 296 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  201 bits (511), Expect = 2e-56
 Identities = 103/266 (38%), Positives = 154/266 (57%), Gaps = 5/266 (1%)

Query: 29  KTAAIGLALILLIVFLALFAPLIAPYDPAAQSIMARLKPPVWMERGTWEHLLGTDNLGRD 88
           K A +G+ +I++++F  +  P + PYD     + AR  PP+     T  H+ GTD LGRD
Sbjct: 30  KLAVLGVIMIMIMIFACVVGPYLLPYDELFIDLRARFAPPL-----TGYHIFGTDPLGRD 84

Query: 89  VLSRIIWGARATLTIGAVTCLLAATLGTVIGLWAGFMGGRTDSILMRLVDIQVSFPGILL 148
           + +R+    R +L +G    +L+  +GTVIG+ AG+ GGR  +ILMR VD  +SFP I L
Sbjct: 85  IAARLFNAGRISLLVGFFAMVLSTLIGTVIGVVAGYYGGRIGAILMRFVDAFLSFPSIFL 144

Query: 149 ILLVVAVLGPGVWTLVAVLSVTNWMVYARLVRGIVSSTRQTPYVEAAEVIGCRPARVIFR 208
           +L + A + P  + +  +++VT+WM  ARLV   V S R+  +V AA ++G     ++FR
Sbjct: 145 LLALAAFVKPSPFMITLIIAVTSWMEIARLVEAEVRSLRERDFVMAARMLGLPNGWIMFR 204

Query: 209 HILPNIVSPLMTLAILEFTNIVLAEAAVSFLGFGVQPPATSWGLDVASGRDYLFIAWWLV 268
            +LPN + P++  A L     +L EA +SFLG+G+QPP  SWG  +   + YL  A WL 
Sbjct: 205 ELLPNAIGPIIVAATLTVARAILLEAYISFLGYGIQPPLPSWGNMLNGAQQYLDKAPWLA 264

Query: 269 TFPGLAIVATVLSINLFANWLRVTTD 294
             PG+AI   V S N   + LR   D
Sbjct: 265 IIPGVAITLAVTSFNFIGDGLRDALD 290