Pairwise Alignments

Query, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  179 bits (453), Expect = 1e-49
 Identities = 108/312 (34%), Positives = 171/312 (54%), Gaps = 10/312 (3%)

Query: 1   MLEFILRRLFQGVLVVFGVTATVFVVTRLV-GDPVALMLPLSATEAQRAAFAQQIGLDQP 59
           ML F+ +RL   + V+  V   +F++ RL  GDP A++   SAT         Q+GL +P
Sbjct: 1   MLTFLGKRLLATLPVLLVVAVAIFMIVRLTPGDPAAVIGGNSATNEDLDRIRVQLGLTRP 60

Query: 60  IATQFLRFVGDIATLDFGNSLWQRRPAIEVVFERLPNTLLLIAAGLGAAVMLSIPLGAVS 119
           +  QF  +   +   D G S +  +P  E++ +R+  TL L    L  AV +++PLG ++
Sbjct: 61  LWEQFAIWCNGVLHGDLGFSFFLNKPVTELIGQRMEPTLSLAGGTLLLAVAIALPLGTLA 120

Query: 120 ALRPGGLVDRLTMSVGLLGLAMPQFWLGLVAIMIFAVTLRWLPTSGMGTAA--------H 171
           A R GG +D+  M+  + G ++P F +G V I + A+ L+W P  G    A         
Sbjct: 121 AWRMGGWLDKAVMAFSVAGFSVPVFVVGYVLIYLLAMKLQWFPVQGYRRIADGVGPWLHQ 180

Query: 172 LVLPALTLALTPLARFTMMVRASMIDELNKPYVKTARAKGLGLTRILRVHTLRNILVPFL 231
           LVLP LTLA+T +A  + + RA++ + L + +++TARAKG+    +L+ H LRN  VP +
Sbjct: 181 LVLPCLTLAITYVALLSRVTRAAVSEALTEDFIRTARAKGITELEVLKHHALRNAAVPVV 240

Query: 232 SISGWELIATLSGYTVVVETVFAWPGLGLTAVQAIQRGDLFLMQAIVFVIAFLIVLIGIA 291
           ++ G    A L G  VV ETVFA PGLG   V A+   D  ++Q +V   A + V + + 
Sbjct: 241 TVIGVS-AALLLGGVVVTETVFAIPGLGQLTVDAVLNRDFPVLQGVVLFFAVVYVAVNLL 299

Query: 292 LDILSKAVDPRM 303
           +D+    +DPR+
Sbjct: 300 VDLSYLFIDPRI 311