Pairwise Alignments

Query, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

 Score =  187 bits (474), Expect = 4e-52
 Identities = 114/309 (36%), Positives = 171/309 (55%), Gaps = 5/309 (1%)

Query: 1   MLEFILRRLFQGVLVVFGVTATVFVVTRLVG-DPVALMLPLS---ATEAQRAAFAQQIGL 56
           ML +IL RL   V V+ G +  VFV+  L   DP    L LS    T+A  A     +GL
Sbjct: 1   MLRYILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAEVRHTLGL 60

Query: 57  DQPIATQFLRFVGDIATLDFGNSLWQRRPAIEVVFERLPNTLLLIAAGLGAAVMLSIPLG 116
           D+P+  Q+L ++ +   LDFG S    RP ++ +   LP TL L    L   ++LSIPLG
Sbjct: 61  DRPLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPLG 120

Query: 117 AVSALRPGGLVDRLTMSVGLLGLAMPQFWLGLVAIMIFAVTLRWLPTSGMGTAAHLVLPA 176
            ++A   G   D    +V  LG++MP FWL  + I +F++ L WLP  G G A HLV+P 
Sbjct: 121 LLAARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLGRGGAGHLVMPV 180

Query: 177 LTLALTPLARFTMMVRASMIDELNKPYVKTARAKGLGLTRILRVHTLRNILVPFLSISGW 236
           L +AL  ++    ++RAS++D   + +V  ARA+GL    + R H LRN  +P ++ +G 
Sbjct: 181 LAIALMSMSINARLLRASLLDAGGQRHVTYARARGLPERHVWRDHILRNAWLPLVTATGM 240

Query: 237 ELIATLSGYTVVVETVFAWPGLGLTAVQAIQRGDLFLMQAIVFVIAFLIVLIGIALDILS 296
             I  L G  +V+ET+FAWPG+G  AV A+   D  +MQ    ++  L+++  + +D+  
Sbjct: 241 H-IGELLGGALVIETIFAWPGVGRFAVSAVLNRDFPVMQCFTLLLTGLLMICNLIVDVCY 299

Query: 297 KAVDPRMEL 305
             +DPR  L
Sbjct: 300 AWLDPRSRL 308