Pairwise Alignments

Query, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 333 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

 Score =  177 bits (450), Expect = 2e-49
 Identities = 103/318 (32%), Positives = 170/318 (53%), Gaps = 18/318 (5%)

Query: 5   ILRRLFQGVLVVFGVTATVFVVTRLV-GDPVALMLPLS--ATEAQRAAFAQQIGLDQPIA 61
           +LR L Q V  +F +    F V +L  GD    M   S  AT+   A   +  GLD P+ 
Sbjct: 16  LLRNLIQAVPTMFVIVTLGFFVLQLAPGDAADYMAAESGAATQETVADIRRAFGLDLPLL 75

Query: 62  TQFLRFVGDIATLDFGNSLWQRRPAIEVVFERLPNTLLLIAAGLGAAVMLSIPLGAVSAL 121
            Q   +   +A    G S     P  +++ ERLP TL L+   +  A+++ I  G + AL
Sbjct: 76  DQLANYYTSLAHFSLGISPRYGVPVADLIMERLPGTLTLMVLAIVIALLVGIAAGTIMAL 135

Query: 122 RPGGLVDRLTMSVGLLGLAMPQFWLGLVAIMIFAVTLRWLPTSGMGT------------- 168
                 DR+     LL  ++P FW+GL+ I++F+V L WLP  GM T             
Sbjct: 136 NATRAADRILSVASLLFYSVPTFWIGLIFIIVFSVKLGWLPAGGMKTIGASSGGFGWLID 195

Query: 169 -AAHLVLPALTLALTPLARFTMMVRASMIDELNKPYVKTARAKGLGLTRILRVHTLRNIL 227
             ++ +LPA +LAL  +A +  + R+S+++ + + +V+TA+AKGL   +++  H LRN L
Sbjct: 196 RVSYALLPATSLALYYMAIYARLTRSSILEVIGQDHVRTAKAKGLAPRQVVLRHVLRNAL 255

Query: 228 VPFLSISGWELIATLSGYTVVVETVFAWPGLGLTAVQAIQRGDLFLMQAIVFVIAFLIVL 287
           +P  +++G  +   L G  +V+ETVF+WPG+G  A  A+   +  L+  I+ V + L++ 
Sbjct: 256 IPITTVAGIHVAGILGG-AIVIETVFSWPGMGRLAFDAVMAREYTLLLGIMLVSSVLVIC 314

Query: 288 IGIALDILSKAVDPRMEL 305
           +   +DI+  A+DPR+E+
Sbjct: 315 VNAIVDIIQAALDPRIEV 332