Pairwise Alignments

Query, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 304 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  237 bits (605), Expect = 2e-67
 Identities = 120/303 (39%), Positives = 187/303 (61%), Gaps = 1/303 (0%)

Query: 1   MLEFILRRLFQGVLVVFGVTATVFVVTRLVGDPVALMLPLSATEAQRAAFAQQIGLDQPI 60
           ML FI +R    ++ + G+   VF ++RL GDP +L LP+ A+   +A F    GLDQP+
Sbjct: 1   MLRFIRKRALASLISLIGLLIMVFFLSRLTGDPASLFLPVEASAEMKAEFRALHGLDQPL 60

Query: 61  ATQFLRFVGDIATLDFGNSLWQRRPAIEVVFERLPNTLLLIAAGLGAAVMLSIPLGAVSA 120
             QF+++VG++ T D G SL + RPA++VV E    TL L    +    + +I +G+++A
Sbjct: 61  LVQFVQYVGNVMTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTICAIVVGSLAA 120

Query: 121 LRPGGLVDRLTMSVGLLGLAMPQFWLGLVAIMIFAVTLRWLPTSGMGTAAHLVLPALTLA 180
            R GG  DR +  V L+G ++P FWL +VAI++FA+ L WLPTSG GT +H +LP   L 
Sbjct: 121 FRTGGFFDRFSSMVSLIGASVPDFWLAIVAIVVFAIQLSWLPTSGTGTLSHWILPICVLF 180

Query: 181 LTPLARFTMMVRASMIDELNKPYVKTARAKGLGLTRILRVHTLRNILVPFLSISGWELIA 240
           + P      +VR SMI  L+  YVKTARAKG+    I+ +H LRN ++P +++ G +  +
Sbjct: 181 VRPFGIIVQVVRGSMISALSSAYVKTARAKGVKSGPIIFIHALRNAMLPVITVIGDQAAS 240

Query: 241 TLSGYTVVVETVFAWPGLGLTAVQAIQRGDLFLMQAIVFVIAFLIVLIGIALDILSKAVD 300
            L+G  VV+ET+F +PG+G   + +I + D  ++ A + V AF I L+ + +D+    +D
Sbjct: 241 LLNG-AVVIETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAFAIFLMNLVIDLAYALLD 299

Query: 301 PRM 303
           PR+
Sbjct: 300 PRI 302