Pairwise Alignments

Query, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 329 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  189 bits (479), Expect = 1e-52
 Identities = 111/314 (35%), Positives = 175/314 (55%), Gaps = 18/314 (5%)

Query: 7   RRLFQGVLVVFGVTATVFVVTRLVGDPVALMLPL---SATEAQRAAFAQQIGLDQPIATQ 63
           R   Q V  V G+    F + +L     A +L     SAT    A    + GLD PI  Q
Sbjct: 13  RVAIQAVPTVLGIVILNFFLLQLAPGDAADVLAAEAGSATVETMAEMRSRFGLDLPIVHQ 72

Query: 64  FLRFVGDIATLDFGNSLWQRRPAIEVVFERLPNTLLLIAAGLGAAVMLSIPLGAVSALRP 123
            + ++G++A    G S     P  +++ +RLP TL L+ A LG A+ + + LG++ AL  
Sbjct: 73  LMNYLGNLAQFSLGFSPRYGMPVADLIGQRLPGTLALMGAALGIAIFVGVFLGSIMALFS 132

Query: 124 GGLVDRLTMSVGLLGLAMPQFWLGLVAIMIFAVTLRWLPTSGMGTAA------------- 170
           G L DR+     L+  ++P FW+GL+ I+ F+V L WLP+ G  T               
Sbjct: 133 GKLPDRIISIGSLIFYSVPGFWIGLMLILTFSVKLGWLPSGGDSTIGSSLTGFAAFLDRL 192

Query: 171 -HLVLPALTLALTPLARFTMMVRASMIDELNKPYVKTARAKGLGLTRILRVHTLRNILVP 229
            ++VLPAL+LAL  LA +  + RA+M++  ++ YV+TARAKG+   R++  H LRN L+P
Sbjct: 193 RYIVLPALSLALYFLAIYARLTRAAMLEVKSQDYVRTARAKGVSPFRLITRHILRNALIP 252

Query: 230 FLSISGWELIATLSGYTVVVETVFAWPGLGLTAVQAIQRGDLFLMQAIVFVIAFLIVLIG 289
             +++G   I  L G  VVVETVF+WPGLG  A +A+   D  ++  I+ + + +++++ 
Sbjct: 253 ITTMAGMH-IGGLLGGAVVVETVFSWPGLGRLAFEAVMARDFSVLLGILLLSSLVVIIVN 311

Query: 290 IALDILSKAVDPRM 303
            A+D+L   +DPR+
Sbjct: 312 AAVDLLQAWLDPRI 325