Pairwise Alignments

Query, 326 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 340 a.a., Oligopeptide transport ATP-binding protein OppD from Xanthobacter sp. DMC5

 Score =  288 bits (737), Expect = 1e-82
 Identities = 166/325 (51%), Positives = 208/325 (64%), Gaps = 8/325 (2%)

Query: 3   LLEIDNLHVCFDTRAGTVQALRGVSLTVAPGETLGIVGESGSGKSVTAQAVMGLI-DVPG 61
           LL++ +L V F T AG + A+  +S  +A GETL IVGESG GKSVTA A++ L+   P 
Sbjct: 6   LLDVKDLTVRFRTPAGRLTAVDRLSFDIAAGETLAIVGESGCGKSVTAMALLRLLRSPPA 65

Query: 62  RISDGEILWEGKPLAGFAVANAARDIWGREITMIFQNPMTSLNPLMTVGAQIAEVIEVHM 121
            IS   + +EG  L   +   A RD+ G  I MIFQ+P+++LNP+ TV  QI E ++ H 
Sbjct: 66  EISGSHVRFEGTELLALS-ERAMRDVRGNRIAMIFQDPLSALNPVRTVADQIIESLKRHT 124

Query: 122 GSSRRAARRRAAELLSAVGISGAERRLDQYPHEFSGGMRQRVMIAMGIACEPKLLIADEP 181
           G    A  RRA ELL  V I   +RR D YPH FSGGMRQRVMIA+ IA  P+LLIADEP
Sbjct: 125 GLRGPALHRRAVELLDLVRIPEPQRRADDYPHHFSGGMRQRVMIAIAIAANPRLLIADEP 184

Query: 182 TTALDVTIQAQILELLAELQEKMGLAIVLITHDLGIVAGLCHRVAVMYAGQIVETGPVDA 241
           TTALDVT+QAQIL+L+  LQ++ G++++LI+HDLG+VA    RV VMYAG+ VE  PV  
Sbjct: 185 TTALDVTVQAQILKLIVSLQKEFGMSLLLISHDLGVVAETADRVLVMYAGRKVEERPVAD 244

Query: 242 IFENPSHPYTQGLIRSTPGLDADEERLTAIDGAPPGLLQPPSGCAFLPRCPIGDEGCQGP 301
           +F  P HPYT+ L+R+ P      E L  I G  P L   P GCAF PRC   DE C   
Sbjct: 245 LFARPLHPYTRALMRARPTPGLRRELLDEIPGIVPSLADLPPGCAFAPRCAHADEACARL 304

Query: 302 Q-VLRAV-GAGTVAC----RKAGEQ 320
           Q VL  V G G+VAC    R AGE+
Sbjct: 305 QPVLEGVGGGGSVACLHLGRLAGEK 329