Pairwise Alignments

Query, 326 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 335 a.a., Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  298 bits (762), Expect = 2e-85
 Identities = 159/319 (49%), Positives = 206/319 (64%), Gaps = 3/319 (0%)

Query: 3   LLEIDNLHVCFDTRAGTVQALRGVSLTVAPGETLGIVGESGSGKSVTAQAVMGLIDVPGR 62
           LLE+++L V F T  G V A+  ++ T+  GETLGIVGESGSGKS TA A+MGL+   GR
Sbjct: 17  LLEVNDLRVTFATPDGDVTAVNDLNFTLRAGETLGIVGESGSGKSQTAFALMGLLATNGR 76

Query: 63  ISDGEILWEGKPLAGFAVANAARDIWGREITMIFQNPMTSLNPLMTVGAQIAEVIEVHMG 122
           I  G   + G+ +           +   +I+MIFQ+PMTSLNP M VG Q+ EV+ +H G
Sbjct: 77  IG-GSATFNGREILNLP-ERELNTLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKG 134

Query: 123 SSRRAARRRAAELLSAVGISGAERRLDQYPHEFSGGMRQRVMIAMGIACEPKLLIADEPT 182
            S+  A   +  +L AV +  A +R+  YPHEFSGGMRQRVMIAM + C PKLLIADEPT
Sbjct: 135 MSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT 194

Query: 183 TALDVTIQAQILELLAELQEKMGLAIVLITHDLGIVAGLCHRVAVMYAGQIVETGPVDAI 242
           TALDVT+QAQI+ LL EL+ +   AI++ITHDLG+VAG+C +V VMYAG+ +E G    +
Sbjct: 195 TALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDV 254

Query: 243 FENPSHPYTQGLIRSTPGLDADEERLTAIDGAPPGLLQPPSGCAFLPRCPIGDEGCQGPQ 302
           F  P HPY+ GL+ + P LD++   +  I G PP LL+ P GC F PRCP   E C    
Sbjct: 255 FYQPVHPYSIGLLNAVPRLDSEGAEMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICNNAP 314

Query: 303 VLRAVGAGTV-ACRKAGEQ 320
            L A   G + AC K  E+
Sbjct: 315 PLEAFSPGRLRACFKPVEE 333