Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 316 a.a., Oligopeptide transport ATP-binding protein OppF from Xanthobacter sp. DMC5

 Score =  308 bits (790), Expect = 9e-89
 Identities = 163/320 (50%), Positives = 210/320 (65%), Gaps = 16/320 (5%)

Query: 5   PVLSVSGLAIDYELSSGGLFRKRRSVNAVSDVSFDLAPGETLGLVGESGSGKTTVGRAVL 64
           P+LSV  L   YE  SGG     R + AV  VSF + PGET+GLVGESG GK+++ + ++
Sbjct: 2   PLLSVENLHAGYE--SGG-----RLLRAVDGVSFAVEPGETVGLVGESGCGKSSLAKVIM 54

Query: 65  RRIPAAQGRIVFGGEDITHLGGEPLRRLRARMQIVLQDPYTSLNPRMKVSSIVAEPLIVH 124
           R +  A GR+VF G D+  L G PL+  R + QIV QDP+ SLNPR  ++ I+  PL VH
Sbjct: 55  RLVSPASGRVVFDGVDVGGLEGAPLKAYRRQAQIVFQDPFASLNPRQSIADILTAPLAVH 114

Query: 125 GLAASAEEARAAVAELLERVGLPGDAADRYPHSFSGGQRQRIGIARALALKPALIVADEP 184
           GL    E  +AA  + LERVGLP +A  RYPH FSGGQRQR+GIARAL L P L++ DEP
Sbjct: 115 GLVPRGERLKAA-GDALERVGLPREALSRYPHEFSGGQRQRLGIARALILFPRLVICDEP 173

Query: 185 VSALDVSVRAQVVNLMQDLQRDLGISYLFIAHDLAIVRHISHRVAIMYAGRIVEIAPRDA 244
           VSALD+S++AQ++NL+  L+ +LG+SYLFI+HDL++VR+ + RV +MY GRIVE     +
Sbjct: 174 VSALDLSIQAQILNLLARLKAELGLSYLFISHDLSVVRYFADRVLVMYLGRIVETGSWQS 233

Query: 245 IYQRPIHPYTEALLSAVPVANPKLQRARRRIVPP--GESVDIASPPTGCRFHPRCPLATD 302
           I+ RP+HPYT AL+ AVP         RRR   P  G+     + PTGCRFHPRCPLAT 
Sbjct: 234 IFARPLHPYTRALIEAVPTP------GRRRHAAPLSGDLPSARNVPTGCRFHPRCPLATP 287

Query: 303 RCREEAPQLLRKTGDHFAAC 322
            C +  P L         AC
Sbjct: 288 LCTQSDPALRPLGAGRAVAC 307