Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 623 a.a., fused predicted peptide transport subunits of ABC superfamily: ATP-binding components (RefSeq) from Escherichia coli BW25113

 Score =  300 bits (767), Expect = 8e-86
 Identities = 159/269 (59%), Positives = 193/269 (71%), Gaps = 1/269 (0%)

Query: 5   PVLSVSGLAIDYELSSGGLFRKRRSVNAVSDVSFDLAPGETLGLVGESGSGKTTVGRAVL 64
           PVL V  L   + L SG L R  R V+AV  VSFDL PGETL LVGESGSGK+T GRA+L
Sbjct: 312 PVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALL 371

Query: 65  RRIPAAQGRIVFGGEDITHLGGEPLRRLRARMQIVLQDPYTSLNPRMKVSSIVAEPLIVH 124
           R + +  G I+F G+ I  L    L+ LR  +Q + QDPY SL+PR  +   + EPL VH
Sbjct: 372 RLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVH 431

Query: 125 GLAASAEEARAAVAELLERVGLPGDAADRYPHSFSGGQRQRIGIARALALKPALIVADEP 184
           GL    ++A A VA LLERVGL  + A RYPH FSGGQRQRI IARALAL P +I+ADE 
Sbjct: 432 GLLPG-KDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEA 490

Query: 185 VSALDVSVRAQVVNLMQDLQRDLGISYLFIAHDLAIVRHISHRVAIMYAGRIVEIAPRDA 244
           VSALDVS+R Q++NL+ DLQRD GI+YLFI+HD+A+V  ISHRVA+MY G+IVEI PR A
Sbjct: 491 VSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRA 550

Query: 245 IYQRPIHPYTEALLSAVPVANPKLQRARR 273
           +++ P HPYT  LL+AVPVA P  QR +R
Sbjct: 551 VFENPQHPYTRKLLAAVPVAEPSRQRPQR 579



 Score =  178 bits (452), Expect = 3e-49
 Identities = 103/270 (38%), Positives = 158/270 (58%), Gaps = 21/270 (7%)

Query: 6   VLSVSGLAIDYELSSGGLFRKRRSVNAVSDVSFDLAPGETLGLVGESGSGKTTVGRAVLR 65
           VL+V  L I +        + ++ + AV ++SF L  GETL +VGESGSGK+    A++R
Sbjct: 12  VLAVENLNIAF-------MQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMR 64

Query: 66  RIPAAQGRIVFG-------GEDITHLGGEPLRRLR----ARMQIVLQDPYTSLNPRMKVS 114
            +  A G +            ++  L  +   ++R    A M ++ Q+P TSLNP   V 
Sbjct: 65  LLEQAGGLVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVG 124

Query: 115 SIVAEPLIVHGLAASAEEARAAVAELLERVGLPGDAA--DRYPHSFSGGQRQRIGIARAL 172
             +AE + +H   AS EEA      +L++V +P       RYPH  SGG RQR+ IA AL
Sbjct: 125 EQIAESIRLHQ-NASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMAL 183

Query: 173 ALKPALIVADEPVSALDVSVRAQVVNLMQDLQRDLGISYLFIAHDLAIVRHISHRVAIMY 232
           + +PA+++ADEP +ALDV+++AQ++ L++ LQ+++ +  +FI HD+ +V  I+ RV +MY
Sbjct: 184 SCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243

Query: 233 AGRIVEIAPRDAIYQRPIHPYTEALLSAVP 262
            G  VE    + I+  P HPYT ALL+AVP
Sbjct: 244 QGEAVETGTVEQIFHAPQHPYTRALLAAVP 273