Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 616 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  279 bits (714), Expect = 1e-79
 Identities = 147/288 (51%), Positives = 192/288 (66%), Gaps = 6/288 (2%)

Query: 5   PVLSVSGLAIDYELSSGGLFRKRRSVNAVSDVSFDLAPGETLGLVGESGSGKTTVGRAVL 64
           P+LSV  L   +++ SG   RK  +V+AV  VSFDLA GETL LVGESG GK+T GR++ 
Sbjct: 313 PILSVKDLTTRFDIRSGLFGRKSGAVHAVEKVSFDLAEGETLSLVGESGCGKSTTGRSIT 372

Query: 65  RRIPAAQGRIVFGGEDITHLGGEPLRRLRARMQIVLQDPYTSLNPRMKVSSIVAEPLIVH 124
           R I    G +   G ++  L    LR +R  +Q+V QDP+ SL+PRM V + + EP + H
Sbjct: 373 RLIEPTSGNVTLDGYEVLKLDRTTLRTMRRSVQMVFQDPFASLDPRMSVGTAIMEPFMEH 432

Query: 125 GLAASAEEARAAVAELLERVGLPGDAADRYPHSFSGGQRQRIGIARALALKPALIVADEP 184
            L   A+ AR   A+LLE+VGL  D   R+PH FSGGQRQRI IAR+L L P +IVADE 
Sbjct: 433 RLGQKAQ-AREKAADLLEKVGLSPDMMKRFPHEFSGGQRQRIAIARSLMLDPKVIVADEA 491

Query: 185 VSALDVSVRAQVVNLMQDLQRDLGISYLFIAHDLAIVRHISHRVAIMYAGRIVEIAPRDA 244
           VSALDVS++AQV NL+ DLQ+ L +++LFI+HD+A+V  +SHRVA+MY G IVEI PR A
Sbjct: 492 VSALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAA 551

Query: 245 IYQRPIHPYTEALLSAVPVANPKLQRARR-----RIVPPGESVDIASP 287
           ++  P HPYT+ L+SAVPV +P  ++ RR      I  P   VD   P
Sbjct: 552 VFDNPQHPYTKKLMSAVPVPDPARRQIRRNMATDEIKSPIRPVDYVPP 599



 Score =  211 bits (538), Expect = 3e-59
 Identities = 119/284 (41%), Positives = 178/284 (62%), Gaps = 21/284 (7%)

Query: 2   TVAPVLSVSGLAIDYELSSGGLFRKRRSVNAVSDVSFDLAPGETLGLVGESGSGKTTVGR 61
           +V+PVLSV  L   + +  G         + V ++SFD+AP ET+ +VGESGSGK+    
Sbjct: 14  SVSPVLSVQNLTTSFRVDGGWK-------SVVRNMSFDIAPRETVAIVGESGSGKSVTSL 66

Query: 62  AVLR----RIPAAQGRIVFGGEDITHLGGEPLRRLRAR-MQIVLQDPYTSLNPRMKVSSI 116
           +++R    +    +G+++ GG D+  L  E +R++R + + ++ Q+P TSLNP   +   
Sbjct: 67  SIMRLLDRKTSRIEGKVMLGGRDLLALPEEEMRKVRGKDISMIFQEPMTSLNPIFPIGKQ 126

Query: 117 VAEPLIVHGLAASAEEARAAVAELLERVGLPGDAADR---YPHSFSGGQRQRIGIARALA 173
           +AE L VH    S+  A+A V  LLE+V +P +AA R   YPH FSGG RQR+ IA ALA
Sbjct: 127 IAEALTVHQ-DISSSAAKAEVIRLLEKVRIP-NAASRFGDYPHQFSGGMRQRVMIAMALA 184

Query: 174 LKPALIVADEPVSALDVSVRAQVVNLMQDLQRDLGISYLFIAHDLAIVRHISHRVAIMYA 233
            KP L++ADEP +ALDV+++ Q+++L++ LQ + G+S LFI HD+ +V  ++ R  +M+ 
Sbjct: 185 SKPKLLIADEPTTALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVADRTIVMFR 244

Query: 234 GRIVEIAPRDAIYQRPIHPYTEALLSAVPVANPKLQRARRRIVP 277
           G +VE    D I+ R  HPYT ALLSAV    PKL   R R++P
Sbjct: 245 GDVVETGTTDDIFHRGQHPYTRALLSAV----PKLGSMRSRLLP 284