Pairwise Alignments

Query, 406 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 412 a.a., ABC transporter for D-Glucosamine, periplasmic substrate-binding protein (from data) from Sinorhizobium meliloti 1021

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 89/378 (23%), Positives = 152/378 (40%), Gaps = 41/378 (10%)

Query: 42  LTNVLAEKLAEEGIRVKYEPVDGDYSQFIINGLSAGTAPDLFYVDTFWARSVFSAGQAAP 101
           +T+  A+   +  + +++ P +G + + ++    +G   D+   D  W     +      
Sbjct: 47  MTDAFAKANPDIKVNLEFVPYEGLHDKTVL-AQGSGGGYDVVLFDVIWPAEYAANNVLLD 105

Query: 102 VTNDVS-----GFAANLLTAFTYDGKLYSIPKDFNTLAIHFNKDIFDDAGVGYPSDDDTW 156
           VT+ V+     G      T   YDGK Y +P   +T  + +NK+I + AG+  P    TW
Sbjct: 106 VTDRVTDEMNKGVLPGAWTTVEYDGKRYGMPWILDTKYLFYNKEILEKAGIKQP--PKTW 163

Query: 157 TTLQEKLVAV-NKSLPE-------VDGLCVVPEY----ARFGAFALSTGWSPFDARGKTV 204
             L E+  A+ +K L E             + +Y    + +G   L  G   F   G   
Sbjct: 164 EELSEQATAIKDKGLLESPIAWSWSQAEAAICDYTTLVSAYGGKFLDGGKPAFTTGGG-- 221

Query: 205 LDKRFRRAFDFYTGLVK-SGAAVMAADAGHSWTGGCLASERAAVAIEGAWILSALRDSAP 263
           LD        + +GL   +    +  D    +  G      AA A+   ++ +   D   
Sbjct: 222 LDALNYMVTSYTSGLTNPNSKEFLEEDVRKVFQNG-----EAAFALNWTYMYNLANDPKE 276

Query: 264 NM---NLGTVRMPKDPESSKRGNIVFSVGWTVNAASKVSKAAAKVAELLTTEEAQQWVLE 320
           +     +G V  P     S+   +  S+G  + A SK  + A K    +T++E Q    +
Sbjct: 277 SKVAGKVGVVPAPGAAGKSEVSAVNGSMGLGITATSKHPEEAWKYIVHMTSQETQNAYAK 336

Query: 321 QGLALPSRTSLNDNPWLRGGQPEQIASRVVLEGLSDDHVMPYF--FGDVGGSWMQPINAA 378
             L+LP   S  +NP +  GQ E IA+     GL+  +  P    + ++  +  Q I  A
Sbjct: 337 --LSLPIWASSYENPNVTKGQEELIAA--AKRGLAAMYPRPTTPKYQELSTALQQAIQEA 392

Query: 379 LNSVILGEEDANTALPSA 396
           L    LG+  A  AL SA
Sbjct: 393 L----LGQSSAEDALKSA 406