Pairwise Alignments

Query, 400 a.a., TRm3 transposase from Sinorhizobium meliloti 1021

Subject, 407 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  571 bits (1472), Expect = e-167
 Identities = 281/397 (70%), Positives = 324/397 (81%), Gaps = 3/397 (0%)

Query: 2   AIEKELLDQLLAGRDPSEVFGKDGLLDDLKKALSERILNAELDDHLDVERLEGGPANRRN 61
           AI  ELLDQLLAG   S  F + GLLD LKKAL+ER LNAE+D HL  E    G  N RN
Sbjct: 8   AIPNELLDQLLAGGAASAAFEQGGLLDSLKKALTERALNAEMDHHLAGE---DGAGNMRN 64

Query: 62  GSSKKTVLTGTSKMTLTIPRDRAGTFDPKLIARYQRRFPDFDDKIISMYARGMTVREIQG 121
           G  +KTV+T T K+ + +PRDR  +FDP+LIA+YQRRFP FDDKI+SMYARGM+ REI  
Sbjct: 65  GYGRKTVMTDTGKLAIDVPRDRQSSFDPQLIAKYQRRFPGFDDKIVSMYARGMSTREITR 124

Query: 122 HLEELYGIDVSPDLISAVTDTVLEAVGEWQNRPLELCYPLVFFDAIRVKIRDEGFVRNKA 181
           HL +LYGIDVSPDLIS VTD VL+ V  WQ RPL+  YPLVFFDAIRVKIRDEG VRNKA
Sbjct: 125 HLHDLYGIDVSPDLISTVTDAVLDEVATWQQRPLDPVYPLVFFDAIRVKIRDEGMVRNKA 184

Query: 182 VYVALAVLADGSKEILGLWIEQTEGAKFWLRVMNELKNRGCQDILIAVVDGLKGFPEAIT 241
           +++AL V ADG+KE+LGLW+EQ EGAKFWLRVMNEL+NRG +DIL+AVVDGLKGFP+AIT
Sbjct: 185 IHIALGVRADGAKEVLGLWLEQNEGAKFWLRVMNELRNRGVEDILLAVVDGLKGFPDAIT 244

Query: 242 AVFPQTIVQTCIVHLIRHSLEFVSYKDRRTVVPALRAIYRARDAEAGLKALEAFEEGYWG 301
           AVFP  IVQTCIVHL+R+S++FVS+KDR+ +  AL+ IYRA DA+A  KAL AFE G WG
Sbjct: 245 AVFPDAIVQTCIVHLLRNSMDFVSWKDRKNLASALKEIYRATDADAAEKALTAFEAGPWG 304

Query: 302 QKYPAIAQSWRRNWEHVVPFFAFPEGVRRIIYTTNAIEALNSKLRRAVRSRGHFPGDEAA 361
           Q+YPAI QSWRR W  V+PFFAFP+ VRRIIYTTNAIEALNSKLRRAVR+RGHFP DEAA
Sbjct: 305 QRYPAIGQSWRRAWGEVIPFFAFPDEVRRIIYTTNAIEALNSKLRRAVRARGHFPSDEAA 364

Query: 362 MKLLYLVLNNAAEQWKRAPREWVEAKTQFAVIFGERF 398
            KLLYL+LN + ++WK  PREW  AK QFAVIFGERF
Sbjct: 365 TKLLYLILNRSEKEWKMPPREWTMAKAQFAVIFGERF 401