Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 279 a.a., ABC transporter for N-Acetyl-D-glucosamine, permease protein 2 (from data) from Sinorhizobium meliloti 1021

 Score =  104 bits (260), Expect = 2e-27
 Identities = 77/303 (25%), Positives = 135/303 (44%), Gaps = 41/303 (13%)

Query: 18  AAVLVITLLFLAPIYWITSTAFKPRNLATTIPPTVIFEPEISPFVKLFTKRSQLRSAPEP 77
           AA++  TL+ L P++     +FK RN        +  EP                + P P
Sbjct: 16  AALIAYTLIALFPVFLTIVNSFKSRN-------AIFREP---------------LAVPTP 53

Query: 78  EDYAAAPWWERLVFDGGEKVVRSGRGQVQLSGYPNRFMNSLIVAITSTVLAVAMGTFTAY 137
           E ++           G E V++ G       GY   F NS+IV + S  L +  G   A+
Sbjct: 54  ETFSLI---------GYETVLKQG----DFIGY---FQNSIIVTVVSIALVLLFGAMAAF 97

Query: 138 GFSRFKVKGEADLLFFILSTRMLPPVVVAIPMFLMYRAVGLNDTHWGLIILYTAFNLSFS 197
             S ++ +G   +  ++    M+P  +  + +     A GL +T   LI++YTA  L  +
Sbjct: 98  ALSEYRFRGNTLMGLYLALGIMIPIRLGTVAILQGMVATGLVNTLTALILVYTAQGLPLA 157

Query: 198 VWLMKGFIDEIPKEYEEAALVDGYTRLEAFFKIVLPEAATGIAATAVFCFITAWNEYAFA 257
           V+++  F+  +  + + A  +DG +    F ++VLP     +A  AVF  I  WN+  F 
Sbjct: 158 VFILSEFMRTVSDDLKNAGRIDGLSEYAIFLRLVLPLIRPAMATVAVFTMIPIWNDLWFP 217

Query: 258 LIMTNRRAQTAPPFIPSQ--VGSGLPDWTVIAAGTFLFLLPVAIFTFLLRNHLLRGMSFG 315
           LI+    A T    + SQ  +G  + +W  + +   L + PV +   +    L+RG++ G
Sbjct: 218 LILAPAEA-TKTVTLGSQIFIGQFVTNWNAVLSALSLAIFPVLVLYVIFSRQLIRGITAG 276

Query: 316 AIR 318
           A++
Sbjct: 277 AVK 279