Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 466 a.a., inner-membrane permease from Sinorhizobium meliloti 1021

 Score =  114 bits (285), Expect = 5e-30
 Identities = 95/322 (29%), Positives = 150/322 (46%), Gaps = 33/322 (10%)

Query: 2   AAVQTRSERALNRVAIAAVLVITLLFLAPIY---WITSTAFKPRNLATTIPPTVIFEPEI 58
           A  Q R +R + +   A   V  + + +  +   WI  T   P NL      T+I  P I
Sbjct: 155 ATKQARDKRGIRQGWQARTFVYEITYRSDRHNGPWIERT---PVNLTAPTSQTLIDSP-I 210

Query: 59  SPFVKLFTKRSQLRSAPEPEDYAAAPWWERLVFDGGEKVVRSGRG-QVQLSGYPNRFMNS 117
           SP       RS+ R      D    P    L+F+   +V+      Q   S   +   NS
Sbjct: 211 SP------SRSERRGRLLSWDNIT-PGALGLIFNNYRRVISETADLQTGKSLIGSWLGNS 263

Query: 118 LIVAITSTVLAVAMGTFTAYGFSRFKVKGEADLLFFILSTRMLPPVVVAIPMFLMYRAVG 177
           L +A    VL + + +   Y  +R K +G   L    L +  +P  V  +  +L++R + 
Sbjct: 264 LAIATGRLVLTLVVASLAGYALARLKFRGSRLLFAAALFSMTIPAQVTFVSNYLIFRDLS 323

Query: 178 LNDTHWGLIILYTAFNLSFSVWLMKGFIDEIPKEYEEAALVDGYTRLEAFFKIVLPEAAT 237
           L +T W +I+++ A   S +V LMK F +  P+E EEAA+VDG  R   F+KIVLP A  
Sbjct: 324 LLNTPWSVIVVFVA---SANVLLMKQFFEAFPREIEEAAIVDGANRFLVFYKIVLPNAKP 380

Query: 238 GIAATAVFCFITAWNEYAFALIMTNRRAQTAPP-FIPSQVG--------SGLP-DWTVIA 287
            +   A+  F  AWN++ + L++      T+PP  +  QVG         G+  DW ++ 
Sbjct: 381 ALLVNAILAFQGAWNDFFWPLVLI-----TSPPEALTIQVGLLSLRRSFGGVQGDWGLVL 435

Query: 288 AGTFLFLLPVAIFTFLLRNHLL 309
           AG F+ ++PV I   L + H++
Sbjct: 436 AGAFISIVPVVILFVLFQRHIV 457