Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 299 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  125 bits (315), Expect = 1e-33
 Identities = 87/303 (28%), Positives = 138/303 (45%), Gaps = 42/303 (13%)

Query: 19  AVLVITLLFLAPIYWITSTAFKPRNLATTIPPTVIFEPEISPFVKLFTKRSQLRSAPEPE 78
           AV V  LLF  P YW+  TA KP    T            SPF                 
Sbjct: 37  AVFVFVLLF--PFYWMAITAVKPNAQLTDYN-------NYSPF----------------- 70

Query: 79  DYAAAPWWERLVFDGGEKVVRSGRGQVQLSGYPNRFMNSLIVAITSTVLAVAMGTFTAYG 138
                 W  R   D  + ++         + YP    N+++VA+ ST+L++A   F AY 
Sbjct: 71  ------WVVRPTLDHIKYLLFE-------TSYPGWLWNTMLVAVGSTILSLAASVFAAYA 117

Query: 139 FSRFKVKGEADLLFFILSTRMLPPVVVAIPMFLMYRAVGLNDTHWGLIILYTAFNLSFSV 198
             R +  G   +   I    ++PP ++ IP+  +    G+ D+   LI  Y  F + F  
Sbjct: 118 IERVRFTGARPVGLLIFLAYLVPPSILFIPLAFIVFKFGIYDSKLALIFTYPTFLIPFCT 177

Query: 199 WLMKGFIDEIPKEYEEAALVDGYTRLEAFFKIVLPEAATGIAATAVFCFITAWNEYAFAL 258
           WL+ G+   IP E EE+ALVDG TR +   KI+LP A  G+ +  +F F  +WNE+ +AL
Sbjct: 178 WLLMGYFRSIPFELEESALVDGATRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYAL 237

Query: 259 -IMTNRRAQTAPPFIPSQVGSG-LPDWTVIAAGTFLFLLPVAIFTFLLRNHLLRGMSFGA 316
             + +   +T P  + +++  G + +W  + AG     LPV I      ++ +  M+ GA
Sbjct: 238 TFIQSSENKTVPVGVLTELVRGDVFEWGALMAGALFGSLPVVILYSFFVDYYVSSMT-GA 296

Query: 317 IRK 319
           +++
Sbjct: 297 VKE 299