Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 276 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

 Score =  142 bits (359), Expect = 7e-39
 Identities = 89/311 (28%), Positives = 155/311 (49%), Gaps = 48/311 (15%)

Query: 12  LNRVAIAAVLVITLLF-LAPIYWITSTAFKPRNLATTIPPTVIFEPEISPFVKLFTKRSQ 70
           L  +A+ A ++ TL+  L P+YW+  TA    +    +PPT  F P+  P   +F +   
Sbjct: 6   LQSLALYATVIFTLVMVLFPVYWLLVTALSTTDELYRLPPT--FWPD-DPQWDIFARV-- 60

Query: 71  LRSAPEPEDYAAAP---WWERLVFDGGEKVVRSGRGQVQLSGYPNRFMNSLIVAITSTVL 127
                    +AA P   W                              NS++ AI S  L
Sbjct: 61  ---------WAAKPILLW----------------------------LWNSMLAAIGSVAL 83

Query: 128 AVAMGTFTAYGFSRFKVKGEADLLFFILSTRMLPPVVVAIPMFLMYRAVGLNDTHWGLII 187
           ++ +     Y  SR+ ++G A +  F+L+ +MLP  ++ IP+F ++ + GL  + W L++
Sbjct: 84  SMLVSVSAGYALSRYSMRGGATMGLFVLTAKMLPATLLVIPLFSIFSSFGLIGSLWTLVL 143

Query: 188 LYTAFNLSFSVWLMKGFIDEIPKEYEEAALVDGYTRLEAFFKIVLPEAATGIAATAVFCF 247
            ++   + F+ W++KG+ D IPKE E+AA+VDG + + A  ++VLP A  G+AATA++ F
Sbjct: 144 AHSTMIIPFATWMLKGYFDTIPKELEQAAMVDGCSPIGAMVRVVLPIATPGLAATALYAF 203

Query: 248 ITAWNEYAFA--LIMTNRRAQTAPPFIPSQVGSGLPDWTVIAAGTFLFLLPVAIFTFLLR 305
           + +W +YA+A   ++ +    TA   I +  G  +  W  I+A +    LP+      L 
Sbjct: 204 VLSWADYAYARTFLVNSPDNWTANLGITTMQGEYVTYWNDISAASVFIALPIIAIYLFLE 263

Query: 306 NHLLRGMSFGA 316
            +L+ G++ GA
Sbjct: 264 RYLVGGLTAGA 274