Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 277 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  134 bits (336), Expect = 3e-36
 Identities = 94/306 (30%), Positives = 148/306 (48%), Gaps = 42/306 (13%)

Query: 15  VAIAAVLVITLLFLAPIYWITSTAFKPRNLATTIPPTVIFEPEISPFVKLFTKRSQLRSA 74
           V I AVL +      PIYW+  T+  P +               +PF +L    SQL   
Sbjct: 11  VRILAVLFMLGFAAFPIYWMFVTSMTPSSEL------------FAPFPRLVPDWSQLGIY 58

Query: 75  PEPEDYAAAPWWERLVFDGGEKVVRSGRGQVQLSGYPNRFMNSLIVAITSTVLAVAMGTF 134
            E  D      W +                           NS +VA  +TVL++ +   
Sbjct: 59  LEVFDTIPVTTWLK---------------------------NSFLVATGTTVLSILLAVL 91

Query: 135 TAYGFSRFKVKGEADLLFFILSTRMLPPVVVAIPMFLMYRAVGLNDTHWGLIILYTAFNL 194
            AY  SRF+  G A L F + +T+MLP  ++ +P++ ++  + L +T  GL++  TAF +
Sbjct: 92  PAYALSRFRFAGLAILGFALFATQMLPEAMLVVPLYSIFGDLNLLNTIPGLVLANTAFVV 151

Query: 195 SFSVWLMKGFIDEIPKEYEEAALVDGYTRLEAFFKIVLPEAATGIAATAVFCFITAWNEY 254
               W++KG ID IP E EEAA VDG +RL+    I++P  A  +AA AV  F   WNEY
Sbjct: 152 PVITWIIKGAIDGIPIEIEEAARVDGCSRLDIVLGIIIPLIAPTLAAAAVISFFHGWNEY 211

Query: 255 AFA-LIMTNRRAQTAPPFIPSQVGS-GLPDWTVIAAGTFLFLLPVAIFTFLLRNHLLRGM 312
            FA  ++++   +TA   + S VG    P  +V+A G  ++ LP  +F    + +++ GM
Sbjct: 212 VFAQTLISSENLRTASVGLASFVGELSTPIHSVMAVGV-IYTLPAIVFYLFAQRYVVAGM 270

Query: 313 SFGAIR 318
           + G+++
Sbjct: 271 TAGSVK 276