Pairwise Alignments

Query, 301 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 315 a.a., ABC transporter for N-Acetyl-D-glucosamine, permease protein 1 (from data) from Sinorhizobium meliloti 1021

 Score =  119 bits (299), Expect = 7e-32
 Identities = 87/290 (30%), Positives = 138/290 (47%), Gaps = 19/290 (6%)

Query: 28  LFIIPTILFLIVFNIFPLIYSLGYSFTDFRASTNAPATFVGLQNYRELLNDPFIWANFAI 87
           +F++P ++      I PL  +L  SF +   + +   TFVGL N++ L  DP   A+F  
Sbjct: 23  VFLLPALVVYTAVMILPLFETLRQSFYN---TVDGQLTFVGLGNFKVLFGDPRWAADFWN 79

Query: 88  TAK----YVIVSVTGQVVVGFGTAMLLN-REIPFKGLITTLLLLPMMLSMAVVGLFWKLL 142
             K    + ++ +  Q  +G   A +L+  ++ F     T + LP +LS  +VG  WKL+
Sbjct: 80  ALKNNFVFFLIHMAVQNPIGIALAAMLSVPKLRFGAFYRTAIFLPTLLSFVIVGFIWKLI 139

Query: 143 YDPSFGIINYAL---GLGSF--EWLANPEMALYAVAITDIWMWSPFVMLLSLAGLSAVPR 197
             P +G+  Y L   GL S    WL  P+ AL AV++  +W +    M+L  A L  +P 
Sbjct: 140 LSPIWGVAPYLLDTVGLRSLFGPWLGKPDTALIAVSLISVWQYIGIPMMLIYAALLNIPD 199

Query: 198 HLYEAAAIDRAGPFYTFFRITLPLVAPILMIAIIFRTMEAFKTFDLAYILTS-----QPT 252
            + EAA +D    +  F++I LPL+ P + I  I   +  F  FDL Y +         +
Sbjct: 200 EVTEAAELDGVTGWSQFWKIKLPLILPAIGIVSILTFVGNFNAFDLIYTVQGALAGPDKS 259

Query: 253 TEVISIRLYKMAFQ-EWQTGRSCALAYIVLIMVLAITNIYVKYLNRVKER 301
           T+++   LY+  F  + Q G     A I  IM L I      YL  ++ R
Sbjct: 260 TDILGTLLYRTFFGFQLQLGDRSMGATIAAIMFLIILAGVALYLFGIQRR 309