Pairwise Alignments

Query, 301 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  148 bits (374), Expect = 1e-40
 Identities = 83/291 (28%), Positives = 159/291 (54%), Gaps = 9/291 (3%)

Query: 20  LSDIKIRNLFIIPTILFLIVFNIFPLIYSLGYSFTDFRAST-NAPATFVGLQNYRELLND 78
           LS +    L ++P  + L VF + PLI+SL  SFT FR +  ++   F+G +NY  +L +
Sbjct: 3   LSKLSAPTLLLLPAFIVLAVFIVLPLIFSLYSSFTPFRLTKPDSLWVFIGFRNYVNVLTN 62

Query: 79  PFIWANFAITAKYVIVSVTGQVVVGFGTAMLLNREIPFKGLITTLLLLPMMLSMAVVGLF 138
              W  F  T   + V++  ++ +G G A+L+N+    +  + T ++ PMM S  +VG  
Sbjct: 63  AEFWVAFGRTVLLLTVALNAEMFLGLGLALLVNKATYGQRALRTAMMFPMMFSPVLVGFQ 122

Query: 139 WKLLYDPSFGIINYAL-GLG----SFEWLANPEMALYAVAITDIWMWSPFVMLLSLAGLS 193
           +K L++ + G +N AL  LG    +  WL +  +AL+++ + ++W  +    +L LAGL 
Sbjct: 123 FKFLFNDNIGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAEVWSSTAVFAILILAGLL 182

Query: 194 AVPRHLYEAAAIDRAGPFYTFFRITLPLVAPILMIAIIFRTMEAFKTFDLAYILTS---Q 250
           A+P+   EAA +D   P+ TF  +T P + P   IA+  R+++  + +D+  I+T     
Sbjct: 183 AMPKDPVEAAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIRSLDVARAYDIVKIMTDGGPA 242

Query: 251 PTTEVISIRLYKMAFQEWQTGRSCALAYIVLIMVLAITNIYVKYLNRVKER 301
             TE++   + + A+ + + G + A+AY+ +++ +  T  + + L   +++
Sbjct: 243 KRTELLWTLIGRTAYGDARMGMANAMAYVAILLSIFFTVYFFRKLAAARQQ 293