Pairwise Alignments

Query, 301 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 305 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  140 bits (354), Expect = 3e-38
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 8/274 (2%)

Query: 28  LFIIPTILFLIVFNIFPLIYSLGYSFTDFRASTNAPATFVGLQNYRELLNDPFIWANFAI 87
           LF  P  ++L++F  +PL+     SFT     T     FVG++NY  L+ D  +W    I
Sbjct: 20  LFAAPVGIYLLLFQFYPLVQQFFMSFTATDLLTPNVNPFVGIENYSFLIEDGELWKVLWI 79

Query: 88  TAKYVIVSVTGQVVVGFGTAMLLNREIPFKGLITTLLLLPMMLSMAVVGLFWKLLYDPSF 147
           TA Y +  V   +  G G+AMLL+     +G+   L+ +P       V L +  +++  +
Sbjct: 80  TAIYTVACVIFAIGTGLGSAMLLDSPFFGRGIARALITVPWAAPSVAVALVFTWIFNSQY 139

Query: 148 GIIN-----YALGLGSFEWLANPEMALYAVAITDIWMWSPFVMLLSLAGLSAVPRHLYEA 202
           GI N       L  G   WL +P +AL A+ +T +W   PF  ++ LA L  VP  L EA
Sbjct: 140 GIFNRVLTGLGLPFGGENWLDDPNLALPAILLTTVWQIFPFSSVVILAALQGVPHELKEA 199

Query: 203 AAIDRAGPFYTFFRITLPLVAPILMIAIIFRTMEAFKTFDLAYILTSQ---PTTEVISIR 259
           A ID A     F   T P + P +++  +F T+ + + FDL +++T       T  + I 
Sbjct: 200 AVIDGADRLNIFKTATWPTIQPTVLMLTLFVTIWSLRRFDLIWLMTQGGPIGATNTLVIE 259

Query: 260 LYKMAFQEWQTGRSCALAYIVLIMVLAITNIYVK 293
           LY+  F     G + ++  I L + L +T IY K
Sbjct: 260 LYRQGFVYRDLGSAASIGMIGLSIALLVTVIYFK 293