Pairwise Alignments

Query, 435 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 439 a.a., ABC transporter for L-Fucose, periplasmic substrate-binding protein (from data) from Sinorhizobium meliloti 1021

 Score =  108 bits (271), Expect = 3e-28
 Identities = 128/468 (27%), Positives = 194/468 (41%), Gaps = 64/468 (13%)

Query: 1   MRKTVAGLLAGISFMIACGTSAQS--------QELTIFWAEWDPANY--LQELVNEYEAE 50
           M + ++G+ AG+  M+AC   A          + +TI         Y  L E + E+E  
Sbjct: 1   MNRLLSGVSAGV-IMLACAMGAAKAADLPGKFEGVTIDAKLIGGQQYEKLYERIGEWEKA 59

Query: 51  TGVKVTVETTPWADFQTKAFTEFNAKGSAYDMVVGDSQW-IGA--ASEAGHYVDL-TEFF 106
           TG KV +          K   E + K    D+  G   W +G+  +S A  Y D+  + F
Sbjct: 60  TGAKVNI-------LSKKNHFELD-KEIKSDIATGGLTWCVGSNHSSFAPQYPDIYADLF 111

Query: 107 NQHKLNEV--MAPATVKYYSEYPANSGKYWSIP-AEGDAVGWSYRKDWFEDPKEMEAFKA 163
                 EV    PA +    +     GK   +P A+ D     ++K  ++D  +   FKA
Sbjct: 112 GLIPSEEVAKFVPAVI----DASTLEGKLVMLPRAQFDVSALYFQKSLYQDEAKKTEFKA 167

Query: 164 KYGYDLAPPKDWKQLRDIAEFFHRPDQKRYGIAIYTDNSYDGLVMGVENAIFS-----FG 218
           KYGYDLAPP  W Q+ D AEFF  P            N Y     G E AI         
Sbjct: 168 KYGYDLAPPDTWAQVSDQAEFFAAP-----------PNFYGTQFAGKEEAINGRFYEMLV 216

Query: 219 GELGDYSTYKVDGIINSEKNVKALEAYRELY--GFTPPGWAKSFFVENNQAITENLAAMS 276
            E G+Y         NS+  V+ALE + +LY     PPG     + +  Q       A++
Sbjct: 217 AEGGEYLDKDGRPAFNSDAGVRALEWFVKLYKDKAVPPGTTNYLWDDLGQGFASGSIAVN 276

Query: 277 MNYFAFFPALVNEASNPNAKVTGFFANPAGPEGDQYAALGGQGISIVSYSENKEEAIKFL 336
           +++  +     +  S+  A   G    PAG  G +    G  G S+     +KE A   +
Sbjct: 277 LDWPGWASFFNDPKSSKVAGNVGVKVQPAGSSGKRTGWSGHHGFSVTESCADKEAAASLV 336

Query: 337 EWFVKDETQKRWAELGGY-TASA------KVLESEEFQNATPYNKAFYETMFRVKDFWAT 389
            W   +++QK  +  G   T SA      K  E + ++  T   +AF E     K  +  
Sbjct: 337 WWLTNEDSQKLESAAGPLPTRSAVWDFNIKAAEGDAYK--TEVLQAFQEA---AKHAFPV 391

Query: 390 PEYAELLIQMNQRIYPYVTA---GQGTAKEALDALAKDWNATFKKYGR 434
           P+ AE  I+++  +YP + A   G  T+KEALDA A+      +  G+
Sbjct: 392 PQTAE-WIEISNAVYPELQAAILGDKTSKEALDAAAEKATGILEDAGK 438