Pairwise Alignments

Query, 284 a.a., VirB9 type IV secretion protein from Sinorhizobium meliloti 1021

Subject, 335 a.a., Conjugative transfer protein TrbG from Variovorax sp. SCN45

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 39/228 (17%)

Query: 35  FVDYQPYNITRIIGSLRSSVQVEFAPDEEIAHVALGNSVAWEV----APAGNIL----FL 86
           F D   Y +   +G +     +   P EE+  VA G++V W V    + +G+ L     +
Sbjct: 114 FTDGALYQVYAAVGRV---TVIALQPGEELVTVAAGDTVRWIVGDTSSGSGDALRVNVMV 170

Query: 87  KPRENQPVTNISVVTTRRDGSTRSYQMELTVRDGKVEVGQNTYFYVKYRYPADE---AER 143
           KP  +   TN+ V T+R     R+Y +ELT  +      +     V + YP D+    +R
Sbjct: 171 KPIRSGLKTNLVVTTSR-----RTYLLELTSTE------KTWMASVSWEYPKDKMLALQR 219

Query: 144 RRQAAAARAIAAQAKEADNVLAIHEAYGPRNWRYSAQGAQ-ALEPQSVYDNGKVTTFAF- 201
           + QAA+A A        + +           +RY+  G+    +P   +D+G+     F 
Sbjct: 220 QAQAASAAAPVESGLSLEKI----------RFRYAISGSNPPWKPLRAFDDGEKVYVQFP 269

Query: 202 --VGNQEMPAIYIENSDGSESLVPKSVDGNLVLVHAISRKFILRRGGD 247
             +   E+P +++  + G   LV         +V  +     LR GGD
Sbjct: 270 PGITQGELPPLFVIGAQGDGQLVNYRFRSPYFIVDRLFGAAELRLGGD 317