Pairwise Alignments

Query, 284 a.a., VirB9 type IV secretion protein from Sinorhizobium meliloti 1021

Subject, 331 a.a., Conjugative transfer protein TrbG from Variovorax sp. SCN45

 Score = 49.7 bits (117), Expect = 9e-11
 Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 39/228 (17%)

Query: 35  FVDYQPYNITRIIGSLRSSVQVEFAPDEEIAHVALGNSVAWEV----APAGNIL----FL 86
           F D   Y +   +G +     +   P EE+  VA G++V W V    + +G+ L     +
Sbjct: 111 FTDGALYQVYAAVGRV---TVIALQPGEELVTVAAGDTVRWIVGDTSSGSGDALRVNVMV 167

Query: 87  KPRENQPVTNISVVTTRRDGSTRSYQMELTVRDGKVEVGQNTYFYVKYRYPADE---AER 143
           KP  +   TN+ + T+R     R+Y +ELT  +      +     V + YP D+    +R
Sbjct: 168 KPIRSGLKTNLVITTSR-----RTYLLELTSTE------KTWMASVSWEYPKDKMLALQR 216

Query: 144 RRQAAAARAIAAQAKEADNVLAIHEAYGPRNWRYSAQGAQ-ALEPQSVYDNGKVTTFAF- 201
           + QAA+A      A   D  L++ +      +RY+  G+    +P   +D+G+     F 
Sbjct: 217 QSQAASA------AAPVDTGLSLEKI----RFRYAVSGSNPPWKPLRAFDDGEKVYIQFP 266

Query: 202 --VGNQEMPAIYIENSDGSESLVPKSVDGNLVLVHAISRKFILRRGGD 247
             +   E+P +++  + G   LV         +V  +     LR GGD
Sbjct: 267 PGIAQGELPPLFVIGAQGDGQLVNYRFRPPYYIVDRLFGAAELRLGGD 314