Pairwise Alignments

Query, 284 a.a., VirB9 type IV secretion protein from Sinorhizobium meliloti 1021

Subject, 332 a.a., Conjugative transfer protein TrbG from Variovorax sp. SCN45

 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 35/226 (15%)

Query: 35  FVDYQPYNITRIIGSLRSSVQVEFAPDEEIAHVALGNSVAWEV--APAGN------ILFL 86
           F D   Y +   +G +     V   P EE+  VA G++V W V    +GN       + +
Sbjct: 112 FTDGALYQVYAAVGRV---TVVSLQPGEELVTVAAGDTVRWIVGDTSSGNGADLRVNVLV 168

Query: 87  KPRENQPVTNISVVTTRRDGSTRSYQMELTVRDGKVEVGQNTYFYVKYRYPADE-AERRR 145
           KP  +   TN+ + T+R     R+Y +ELT  D      +     V + YP D     +R
Sbjct: 169 KPIRSGLKTNLVITTSR-----RTYLLELTSTD------KTWMASVSWEYPRDRMLALQR 217

Query: 146 QAAAARAIAAQAKEADNVLAIHEAYGPRNWRYSAQGAQA-LEPQSVYDNGKVTTFAF--- 201
           QA AA A    A   D+ L++        +RY+  G+    +P   +D+G      F   
Sbjct: 218 QAQAASA----AAPVDSGLSLESL----RFRYAISGSNTPWKPLRAFDDGAKVYIQFPAG 269

Query: 202 VGNQEMPAIYIENSDGSESLVPKSVDGNLVLVHAISRKFILRRGGD 247
           +   ++P +++  ++G   LV         +V  +     LR GGD
Sbjct: 270 IAQGDLPPLFVIGAEGDGQLVNYRFRSPYYIVDRLFGAAELRLGGD 315