Pairwise Alignments

Query, 284 a.a., VirB9 type IV secretion protein from Sinorhizobium meliloti 1021

Subject, 293 a.a., component of type IV secretion system from Agrobacterium fabrum C58

 Score =  153 bits (387), Expect = 4e-42
 Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 13/288 (4%)

Query: 2   RTTFIATLLLTAAAPTALALEIPRGATQDSRVRFVDYQPYNITRIIGSLRSSVQVEFAPD 61
           +  F+    L  AA  A A + P     D R+R++ Y P  + R+  ++ +++ V F  +
Sbjct: 3   KKAFLTLACLLFAAIGARAEDTPTAGRLDPRMRYLAYNPDQVVRLSTAVGATLVVTFGAN 62

Query: 62  EEIAHVALGNSVAWEVAPAGNILFLKPRENQPVTNISVVTTRRDGSTRSYQMELTVRD-G 120
           E +  VA+ NS      P GN LF K  +  P   + VV T  D   R Y   ++ +   
Sbjct: 63  ETVTAVAVSNSKDLAALPRGNYLFFKASKVLPPQPV-VVLTASDAGMRRYVFSISSKTLP 121

Query: 121 KVEVGQ-NTYFYVKYRYPADEAERRRQAAAARAIAAQAK-------EADNVL---AIHEA 169
            ++  Q + Y+ V++ YPAD+A  R++AA  +A+A + +        A+ +L   A    
Sbjct: 122 HLDKEQADLYYSVQFAYPADDAAARQKAAQEKAVADRIRAEAQYQQRAEGLLEQPATTVG 181

Query: 170 YGPRNWRYSAQGAQALEPQSVYDNGKVTTFAFVGNQEMPAIYIENSDGSESLVPKSVDGN 229
              +NW Y AQG ++L P  V+D+G  T F F GN  +P+IY  N DG E++   SV G+
Sbjct: 182 AEDKNWHYVAQGDRSLLPLEVFDDGFTTVFHFPGNVRIPSIYTINPDGKEAVANYSVKGS 241

Query: 230 LVLVHAISRKFILRRGGDVLCVFNEAYDRVGINPDTSTTSPSVERIVR 277
            V + ++SR + LR G  VLC++N AYD VG  P+T T  P V+R+++
Sbjct: 242 YVEISSVSRGWRLRDGHTVLCIWNTAYDPVGRRPETGTVRPDVKRVLK 289