Pairwise Alignments

Query, 284 a.a., VirB9 type IV secretion protein from Sinorhizobium meliloti 1021

Subject, 283 a.a., type IV secretion protein AvhB9 from Agrobacterium fabrum C58

 Score =  481 bits (1237), Expect = e-140
 Identities = 236/279 (84%), Positives = 260/279 (93%)

Query: 1   MRTTFIATLLLTAAAPTALALEIPRGATQDSRVRFVDYQPYNITRIIGSLRSSVQVEFAP 60
           MR   I  L++T +   A ALEIPRGA+QDSR+RFV+YQPYNITR++G+LRSSVQVEFA 
Sbjct: 1   MRIPRIPALIVTLSMSPAFALEIPRGASQDSRIRFVNYQPYNITRVVGTLRSSVQVEFAA 60

Query: 61  DEEIAHVALGNSVAWEVAPAGNILFLKPRENQPVTNISVVTTRRDGSTRSYQMELTVRDG 120
           DEEIAHVALGNSVAWEVAPAGNILFLKPRE+QPVTNISVVTTRRDGSTRSYQMELT RDG
Sbjct: 61  DEEIAHVALGNSVAWEVAPAGNILFLKPRESQPVTNISVVTTRRDGSTRSYQMELTARDG 120

Query: 121 KVEVGQNTYFYVKYRYPADEAERRRQAAAARAIAAQAKEADNVLAIHEAYGPRNWRYSAQ 180
            VE GQNTYFYVKYRYP D+AE RRQ AA+RA+AAQAK+ADNVLA+HEAYGPRNWRYS+Q
Sbjct: 121 SVEAGQNTYFYVKYRYPGDDAELRRQQAASRALAAQAKDADNVLALHEAYGPRNWRYSSQ 180

Query: 181 GAQALEPQSVYDNGKVTTFAFVGNQEMPAIYIENSDGSESLVPKSVDGNLVLVHAISRKF 240
           G+QALEPQSVYDNGK+TTFAFVGNQEMPAIY+ENSDGSESLVPKSVDG+LV+VHAISRKF
Sbjct: 181 GSQALEPQSVYDNGKITTFAFVGNQEMPAIYMENSDGSESLVPKSVDGDLVMVHAISRKF 240

Query: 241 ILRRGGDVLCVFNEAYDRVGINPDTSTTSPSVERIVRID 279
           ILRRG DVLCVFNEAYDRVGINPDT+TTSPSVER+V+ D
Sbjct: 241 ILRRGKDVLCVFNEAYDRVGINPDTNTTSPSVERVVKRD 279