Pairwise Alignments

Query, 329 a.a., VirB11-like ATPase from Sinorhizobium meliloti 1021

Subject, 309 a.a., Conjugative transfer protein TrbB from Sphingobium sp. HT1-2

 Score =  115 bits (289), Expect = 1e-30
 Identities = 89/275 (32%), Positives = 136/275 (49%), Gaps = 40/275 (14%)

Query: 25  SLYEVIVNRPGQVLTEGAGGWRTYDLPELSFEKLMRLARAVASFSHQSIDETRPILSATL 84
           ++ E++VN  G +  +  G  R      L+ +++ R+ R VAS     +   +PI+SA L
Sbjct: 5   TVVEIMVNPDGALRLDRLGSGRIDTEVRLAPDQVERIIRLVASHVRAEVHAGQPIISAEL 64

Query: 85  P------GDERIQIVIPPATTRNTVSITIRKPSSVTFTLNDLKEREFFSETRSANDGAST 138
           P        ER + V+PP ++    SI  RKP+    TL D        ET +       
Sbjct: 65  PPHADGRAGERFEGVLPPVSSAPCFSI--RKPAQRLHTLADYVADGLMGETVACA----- 117

Query: 139 RDDGLLALYRAGRFKEFLRHAVISRKNIIISGATGSGKTTLSKALIKHI-PEHE----RI 193
                            LR AV  R NI+++G T SGKTTL+ AL+  + PE+     R+
Sbjct: 118 -----------------LRAAVTERLNILVAGGTSSGKTTLANALLAEMAPENSAVDSRV 160

Query: 194 ISIEDTPELIIPQPNHVRLFYSKGAQGLSGAGPKELLESCLRMRPDRILLQELRDGTAFY 253
           I IEDT EL  P P+ V L        ++     +L+ S +R+RPDRI++ E+R   A  
Sbjct: 161 ILIEDTRELQCPLPDTVALRTRPPHVAMT-----DLVRSTMRLRPDRIIVGEVRGPEALD 215

Query: 254 YVRNVNSGHPGSITTVHADSAKLAFQQLTLLVKES 288
            ++  N+GHPG + T+HA+SA  A  +L  L +E+
Sbjct: 216 MLKAWNTGHPGGVATIHANSAAAALTRLEQLCQEA 250