Pairwise Alignments

Query, 329 a.a., VirB11-like ATPase from Sinorhizobium meliloti 1021

Subject, 355 a.a., Conjugative transfer protein TrbB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  106 bits (265), Expect = 7e-28
 Identities = 88/284 (30%), Positives = 138/284 (48%), Gaps = 32/284 (11%)

Query: 9   VVRELLSPF-APFLGDRSLYEVIVNRPGQVLTEGAGGWRTYDLPELSFEKLMRLARAVAS 67
           ++R  + P  A  L D  + E+++N    +  +     R     ELS     R+ R VA+
Sbjct: 25  MLRTAMGPLIATALEDPDVVEIMLNPDRTLWIDRLSSGRAPMGVELSEADGERIIRLVAA 84

Query: 68  FSHQSIDETRPILSATLPGD-ERIQIVIPPATTRNTVSITIRKPSSVTFTLNDLKEREFF 126
                +   +P+LSA LP   ER + ++PPA    T ++  R    +        ER   
Sbjct: 85  HVGAEVHRGQPLLSAELPETGERFEGILPPAAPGPTFALRKRAIGVIPL------ERYVV 138

Query: 127 SETRSANDGASTRDDGLLALYRAGRFKEFLRHAVISRKNIIISGATGSGKTTLSKALIKH 186
                         DG++   +AG     L  AV  R+N++I+GAT SGKTTL+ AL+  
Sbjct: 139 --------------DGMMTAAQAG----LLVRAVRERQNVLIAGATSSGKTTLANALLAE 180

Query: 187 IPEH-ERIISIEDTPELIIPQPNHVRLFYSKGAQGLSGAGPKELLESCLRMRPDRILLQE 245
           I    +R++ +EDT EL     +HV L   +G   ++     EL+ S +R+RPDR+++ E
Sbjct: 181 IAATGDRVLVLEDTVELQCAARDHVPLRTRQGVVSMT-----ELVRSSMRLRPDRVVVGE 235

Query: 246 LRDGTAFYYVRNVNSGHPGSITTVHADSAKLAFQQLTLLVKESA 289
           +R   A   ++   +GHPG I T+HA SA  A  +L  L+ E A
Sbjct: 236 VRGAEALDLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVA 279