Pairwise Alignments

Query, 329 a.a., VirB11-like ATPase from Sinorhizobium meliloti 1021

Subject, 336 a.a., type IV secretion protein AvhB11 from Agrobacterium fabrum C58

 Score =  489 bits (1260), Expect = e-143
 Identities = 250/329 (75%), Positives = 283/329 (86%), Gaps = 1/329 (0%)

Query: 1   MTEGADATVVRELLSPFAPFLGDRSLYEVIVNRPGQVLTEGAGGWRTYDLPELSFEKLMR 60
           M+E  ++ VV ELL PF+ FL D+SL EVIVNRPGQVLTEG GGWRTY++PEL+FEKLMR
Sbjct: 1   MSERQESAVVSELLKPFSTFLQDKSLLEVIVNRPGQVLTEGPGGWRTYEMPELTFEKLMR 60

Query: 61  LARAVASFSHQSIDETRPILSATLPGDERIQIVIPPATTRNTVSITIRKPSSVTFTLNDL 120
           LARAVASFSHQSIDETRPILSATLPG+ERIQIVIPPAT  +TVS+TIRKPSSV F+L+DL
Sbjct: 61  LARAVASFSHQSIDETRPILSATLPGNERIQIVIPPATINDTVSMTIRKPSSVDFSLDDL 120

Query: 121 KEREFFSETRSAND-GASTRDDGLLALYRAGRFKEFLRHAVISRKNIIISGATGSGKTTL 179
           +E+ FF    +A    +S +D+ L   YRAGRFK+FLR AVI+RKNIIISGATGS KTTL
Sbjct: 121 EEKGFFQTACAATSTSSSAQDEELCETYRAGRFKDFLRQAVIARKNIIISGATGSAKTTL 180

Query: 180 SKALIKHIPEHERIISIEDTPELIIPQPNHVRLFYSKGAQGLSGAGPKELLESCLRMRPD 239
           SKALIKHIPE+ER+ISIEDTPEL+I QPNHVRLFYSKG QGLS AGPKELLESCLRMRPD
Sbjct: 181 SKALIKHIPENERVISIEDTPELVISQPNHVRLFYSKGRQGLSRAGPKELLESCLRMRPD 240

Query: 240 RILLQELRDGTAFYYVRNVNSGHPGSITTVHADSAKLAFQQLTLLVKESAGGRNLDRDDI 299
           RILLQELRDGTAFYY+RNVNSGHPGSITTVHA+SA+LAF+QL LLVKES G   LDR DI
Sbjct: 241 RILLQELRDGTAFYYIRNVNSGHPGSITTVHANSAELAFEQLVLLVKESEGVAGLDRADI 300

Query: 300 DKLLKVSIDVIVQCKRIDGRFRATEIYVR 328
             LLK SID++ QC+R  G FR +E+Y R
Sbjct: 301 VALLKASIDIVAQCRRNKGNFRLSEVYFR 329